RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	DMC1	Q14565	340 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TPSAB1	Q15661	275 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TEX44	Q53QW1	395 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	C2orf27A	Q580R0	203 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	HSP90B2P	Q58FF3	399 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM133B	Q5BKY9	247 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	DNAJC21	Q5F1R6	531 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	MPP7	Q5T2T1	576 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	PID1	Q7Z2X4	250 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TRMT11	Q7Z4G4	463 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TMC3	Q7Z5M5	1100 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TFAP2D	Q7Z6R9	452 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	C12orf40	Q86WS4	652 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	SUMF1	Q8NBK3	374 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	IGSF8	Q969P0	613 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	TTC25	Q96NG3	672 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	ZNF599	Q96NL3	588 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	FUT8	Q9BYC5	575 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	SLC39A8	Q9C0K1	460 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	C10orf88	Q9H8K7	445 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	SP110	Q9HB58	689 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	EIF2B3	Q9NR50	452 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	DNAJC17	Q9NVM6	304 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	C2orf42	Q9NWW7	574 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	IPO11	Q9UI26	975 aa	Known RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	FBXO10	Q9UK96	956 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	MMP17	Q9ULZ9	603 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	MFHAS1	Q9Y4C4	1052 aa		13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP188-208	ENST00000491502	GOLGA6L7	A0A1B0GV03	622 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	MAP2K7	O14733	419 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	APBB3	O95704	486 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	RHOC	P08134	193 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	CCNB1	P14635	433 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	MAGEA6	P43360	314 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	IL10RB	Q08334	325 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	SEMA5A	Q13591	1074 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	HNRNPD	Q14103	355 aa	Known RBP	13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	E2F5	Q15329	346 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	HIF1A	Q16665	826 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	ALF	Q53S48	1182 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	CCDC25	Q86WR0	208 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	RELL1	Q8IUW5	271 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	ARHGAP12	Q8IWW6	846 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM217A	Q8IXS0	508 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	PHTF2	Q8N3S3	785 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	TERB1	Q8NA31	727 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	GLIS1	Q8NBF1	620 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	MCU	Q8NE86	351 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	CCDC110	Q8TBZ0	833 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	CPT1B	Q92523	772 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	CCDC77	Q9BR77	488 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	SLC2A11	Q9BYW1	496 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	XAB2	Q9HCS7	855 aa	Known RBP	13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	EBF1	Q9UH73	591 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	ATP8A1	Q9Y2Q0	1164 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	AAR2	Q9Y312	384 aa	Known RBP	13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	STARD13	Q9Y3M8	1113 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM186A	A6NE01	2351 aa		13.72	□□□□□ -0.21
NUP188-208	ENST00000491502	GOLGA6L10	A6NI86	522 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502		H0Y626	953 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	OPA1	O60313	960 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	ANXA9	O76027	345 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	CNTN5	O94779	1100 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	PENK	P01210	267 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	JCHAIN	P01591	159 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM153B	P0C7A2	387 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	VAV1	P15498	845 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	PTPN3	P26045	913 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	SLC6A4	P31645	630 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	KIR2DL1	P43626	348 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	DGKG	P49619	791 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	DGKE	P52429	567 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	EIF3B	P55884	814 aa	Known RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	RFTN1	Q14699	578 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM153C	Q494X1	144 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	EOGT	Q5NDL2	527 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	MARC1	Q5VT66	337 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	DENND2C	Q68D51	928 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	RFWD3	Q6PCD5	774 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	LRIG3	Q6UXM1	1119 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	ZNF567	Q8N184	647 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	NAT8L	Q8N9F0	302 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	DDI1	Q8WTU0	396 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	PRCC	Q92733	491 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	LRRC39	Q96DD0	335 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	TEKT5	Q96M29	485 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	NEUROG2	Q9H2A3	272 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	PABPC3	Q9H361	631 aa	Known RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	ETNK1	Q9HBU6	452 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	FAM153A	Q9UHL3	310 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	RSPH14	Q9UHP6	348 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	SMG5	Q9UPR3	1016 aa	Known RBP	13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	TBC1D30	Q9Y2I9	924 aa		13.71	□□□□□ -0.21
NUP188-208	ENST00000491502	KCNK1	O00180	336 aa		13.7	□□□□□ -0.22
NUP188-208	ENST00000491502	AXIN1	O15169	862 aa		13.7	□□□□□ -0.22
NUP188-208	ENST00000491502	HR	O43593	1189 aa		13.7	□□□□□ -0.22
NUP188-208	ENST00000491502	TSPAN3	O60637	253 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms