RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ENTPD2Q9Y5L3 495 aa17.29■□□□□ 0.36
TOP3B-217ENST00000489581 CHD5Q8TDI0 1954 aa17.29■□□□□ 0.36
TOP3B-217ENST00000489581 IGLV3-10A0A075B6K4 115 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 ILVBLA1L0T0 632 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PMS2P1A4D2B8 440 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 EME2A4GXA9 379 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PYCARD-AS1I3L0S3 204 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 CASC3O15234 703 aaKnown RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 F9P00740 461 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PON1P27169 355 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 CCNHP51946 323 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 EIF2B5Q13144 721 aaKnown RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 NR0B2Q15466 257 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PERM1Q5SV97 790 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 ARTNQ5T4W7 220 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 RETSATQ6NUM9 610 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PARS2Q7L3T8 475 aaKnown RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PCDH20Q8N6Y1 951 aaKnown RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 PRR11Q96HE9 360 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 KLF6Q99612 283 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 C1QTNF2Q9BXJ5 285 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 TM6SF2Q9BZW4 377 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 CEP44Q9C0F1 390 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 TCEAL2Q9H3H9 227 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-217ENST00000489581 ZDHHC6Q9H6R6 413 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 SALL4Q9UJQ4 1053 aa17.28■□□□□ 0.36
TOP3B-217ENST00000489581 MUSKO15146 869 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 AP1G1O43747 822 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 KRT10P13645 584 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 GKP32189 559 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 ARF5P84085 180 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 SLC20A2Q08357 652 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 C1orf61Q13536 156 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 FAM102AQ5T9C2 384 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-217ENST00000489581 KIAA1614Q5VZ46 1190 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 IGF2-ASQ6U949 168 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 RBM44Q6ZP01 1051 aaKnown RBP17.27■□□□□ 0.36
TOP3B-217ENST00000489581 ZDHHC17Q8IUH5 632 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 RBFAQ8N0V3 343 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 SNRNP27Q8WVK2 155 aaKnown RBP17.27■□□□□ 0.36
TOP3B-217ENST00000489581 LENG8Q96PV6 779 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-217ENST00000489581 NCKIPSDQ9NZQ3 722 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 HECAQ9UBI9 543 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-217ENST00000489581 ZNF212Q9UDV6 495 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 GGT7Q9UJ14 662 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 DNAJC12Q9UKB3 198 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 ITM2BQ9Y287 266 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 SSUH2Q9Y2M2 353 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.36
TOP3B-217ENST00000489581 B8ZZF3 427 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 K7ENP7 123 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 NEMP1O14524 444 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 TPP1O14773 563 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 GCATO75600 419 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 C6P13671 934 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 FLT3P36888 993 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 ABL2P42684 1182 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 SKOR1P84550 965 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 GNA12Q03113 381 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 PRRT3Q5FWE3 981 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 INO80CQ6PI98 192 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-217ENST00000489581 ZNF783Q6ZMS7 281 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 RYBPQ8N488 228 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-217ENST00000489581 OR6K2Q8NGY2 324 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 PDCL3Q9H2J4 239 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 NAV2Q8IVL1 2488 aa17.26■□□□□ 0.35
TOP3B-217ENST00000489581 C16orf96A6NNT2 1141 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 CDRT15L2A8MXV6 281 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 TSPAN6O43657 245 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 CD160O95971 181 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 ADKP55263 362 aaKnown RBP17.25■□□□□ 0.35
TOP3B-217ENST00000489581 PFN3P60673 137 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 C2CD6Q53TS8 623 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 ACBD5Q5T8D3 534 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-217ENST00000489581 TRNP1Q6NT89 227 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 FAM131BQ86XD5 332 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 XYLT1Q86Y38 959 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 SLC35F3Q8IY50 421 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 TMEM35BQ8NCS4 154 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 BTN2A2Q8WVV5 523 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 C18orf8Q96DM3 657 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 CCDC97Q96F63 343 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-217ENST00000489581 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 HAPLN3Q96S86 360 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 BOCQ9BWV1 1114 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 WDR70Q9NW82 654 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 APOBEC3BQ9UH17 382 aaKnown RBP17.25■□□□□ 0.35
TOP3B-217ENST00000489581 PNMA8BQ9ULN7 279 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-217ENST00000489581 PCDHGA8Q9Y5G5 932 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 LRRK1Q38SD2 2015 aa17.25■□□□□ 0.35
TOP3B-217ENST00000489581 SPTA1P02549 2419 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms