RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SLC8A1P32418 973 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 CETN2P41208 172 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 P2RY2P41231 377 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 MMP13P45452 471 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 MAXP61244 160 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 SNRPD1P62314 119 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 OTUD4Q01804 1114 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 AP1B1Q10567 949 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ZBTB17Q13105 803 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 NOMO1Q15155 1222 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 LPAL2Q16609 132 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ZC3H14Q6PJT7 736 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 METTL3Q86U44 580 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ZC3H18Q86VM9 953 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ACTL9Q8TC94 416 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 GANCQ8TET4 914 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 NSMCE1Q8WV22 266 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 GAB3Q8WWW8 586 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 MAML1Q92585 1016 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 P3H4Q92791 437 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ARRDC3Q96B67 414 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 TSGA13Q96PP4 275 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 PSKH2Q96QS6 385 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 HEPHQ9BQS7 1158 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 CARD9Q9H257 536 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 NT5MQ9NPB1 228 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 SEPT10Q9P0V9 454 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 MBD1Q9UIS9 605 aaPredicted RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 TRPM6Q9BX84 2022 aa11.21□□□□□ -0.62
UBE4B-210ENST00000488228 PI4KAP42356 2102 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 SCN8AQ9UQD0 1980 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 PRNPP04156 253 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 C5AR1P21730 350 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 CCNCP24863 283 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 CXCR5P32302 372 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 DRD3P35462 400 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 NR2C2P49116 596 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 CNTN1Q12860 1018 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 KLF1Q13351 362 aaPredicted RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 MYLK3Q32MK0 819 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 USP39Q53GS9 565 aaKnown RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 LRRC73Q5JTD7 316 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 MARC1Q5VT66 337 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 TIGD7Q6NT04 549 aaPredicted RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 CEP68Q76N32 757 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 PARS2Q7L3T8 475 aaKnown RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 KBTBD6Q86V97 674 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 LRRC49Q8IUZ0 686 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 ATG4AQ8WYN0 398 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 TOE1Q96GM8 510 aaKnown RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 WDR24Q96S15 920 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 FBXL12Q9NXK8 326 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 EFR3BQ9Y2G0 817 aa11.2□□□□□ -0.62
UBE4B-210ENST00000488228 FARP1Q9Y4F1 1045 aaPredicted RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
UBE4B-210ENST00000488228 ADAMTS9Q9P2N4 1935 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 FRYLO94915 3013 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 H7C0C1 242 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 MATN3O15232 486 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF217O75362 1048 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 NEBLO76041 1014 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 TJP3O95049 919 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 JCHAINP01591 159 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 IGLV3-19P01714 112 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 C7P10643 843 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 CCNB1P14635 433 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 CR2P20023 1033 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ACSL1P33121 698 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 HSPA9P38646 679 aaKnown RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ATP5OP48047 213 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 SCNN1BP51168 640 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 EIF3EP60228 445 aaKnown RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 GNG11P61952 73 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 DSC2Q02487 901 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 NHLH1Q02575 133 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 RPL6Q02878 288 aaKnown RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 SIM2Q14190 667 aaPredicted RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 SLC45A4Q5BKX6 768 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 PIP5KL1Q5T9C9 394 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms