RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FMO4P31512 558 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ARL1P40616 181 aaPredicted RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 CPA2P48052 419 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ARSFP54793 590 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 DRG2P55039 364 aaKnown RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 EIF3BP55884 814 aaKnown RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ARF3P61204 181 aaPredicted RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ARF1P84077 181 aaKnown RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 PRKG2Q13237 762 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 EIF4A2Q14240 407 aaKnown RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 SYTL3Q4VX76 610 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 SPATA1Q5VX52 437 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 FAM57BQ71RH2 274 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 TRIM73Q86UV7 250 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 FAM160B2Q86V87 743 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ADSSL1Q8N142 457 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 C11orf65Q8NCR3 313 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 HDAC7Q8WUI4 952 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 DPF1Q92782 380 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 SH2D3AQ9BRG2 576 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ACTR5Q9H9F9 607 aaPredicted RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 C20orf141Q9NUB4 165 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 KIAA1456Q9P272 454 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 CDH22Q9UJ99 828 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 PCDHGB5Q9Y5G0 923 aa5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 ARHGEF17Q96PE2 2063 aaPredicted RBP5.28□□□□□ -1.56
PRPF38A-203ENST00000487160 WDR33Q9C0J8 1336 aaKnown RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 FOXO6A8MYZ6 492 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 FAM157AC9JC47 383 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 RHODO00212 210 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 LATS1O95835 1130 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 SCGB1D1O95968 90 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 TUBB4AP04350 444 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 ACADMP11310 421 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 BMP5P22003 454 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 PSMA4P25789 261 aaKnown RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 ARL3P36405 182 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 BLKP51451 505 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 EFNA5P52803 228 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 CLNS1AP54105 237 aaKnown RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC10A2Q12908 348 aaPredicted RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 MAMLD1Q13495 774 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC9C1Q4G0N8 1177 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 MIDNQ504T8 468 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 SERTAD4-AS1Q5TG53 156 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 TBC1D9BQ66K14 1250 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 RD3Q7Z3Z2 195 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 UBE2Q1Q7Z7E8 422 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 IGFN1Q86VF2 1251 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 GALNT16Q8N428 558 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 CMASQ8NFW8 434 aaPredicted RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 WIPF2Q8TF74 440 aaPredicted RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 IGFBPL1Q8WX77 278 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 ZNF419Q96HQ0 510 aaPredicted RBP5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 TIGD1Q96MW7 591 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 FAM118BQ9BPY3 351 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 GHITMQ9H3K2 345 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 AAMDCQ9H7C9 122 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 KAT6BQ8WYB5 2073 aa5.27□□□□□ -1.57
PRPF38A-203ENST00000487160 ADGRF5Q8IZF2 1346 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TRBV5-7A0A0A0MS05 114 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 DDTLA6NHG4 134 aaPredicted RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 IFNL4K9M1U5 179 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TP73O15350 636 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC25A17O43808 307 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TMCC1O94876 653 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 LAMP2P13473 410 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 NFKBIAP25963 317 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 POU1F1P28069 291 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CPOXP36551 454 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 DPP6P42658 865 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 RPL7AP62424 266 aaKnown RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 GHRHRQ02643 423 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TMEM115Q12893 351 aaPredicted RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 FOXF2Q12947 444 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 PKP1Q13835 747 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TAF11Q15544 211 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 ISM2Q6H9L7 571 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CDC73Q6P1J9 531 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 PTF1AQ7RTS3 328 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 GPAT4Q86UL3 456 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 DDIASQ8IXT1 998 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CADM4Q8NFZ8 388 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 USP6NLQ92738 828 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CLMNQ96JQ2 1002 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 GLIS2Q9BZE0 524 aaPredicted RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 EIF2B3Q9NR50 452 aaKnown RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 SEPT11Q9NVA2 429 aaKnown RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 TMEM45AQ9NWC5 275 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CTNNAL1Q9UBT7 734 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 PLEKHB1Q9UF11 243 aaPredicted RBP5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC45A1Q9Y2W3 748 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 NEO1Q92859 1461 aa5.26□□□□□ -1.57
PRPF38A-203ENST00000487160 CFAP74Q9C0B2 1584 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 KIR2DS5A0A0G2JLQ3 304 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms