RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 FAM110CQ1W6H9 321 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 TMEM198Q66K66 360 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 DCLRE1AQ6PJP8 1040 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 TMC7Q7Z402 723 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 LSMEM2Q8N112 164 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 TMEM86AQ8N2M4 240 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 RDH11Q8TC12 318 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 RNF34Q969K3 372 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 SMARCD1Q96GM5 515 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 FTHL17Q9BXU8 183 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 SIK2Q9H0K1 926 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 RRN3Q9NYV6 651 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 CLIC5Q9NZA1 410 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 MID2Q9UJV3 735 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 NEU3Q9UQ49 428 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 PTCH2Q9Y6C5 1203 aa17.77■□□□□ 0.44
TNXB-205ENST00000486148 CASTOR2A6NHX0 329 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CACNG3O60359 315 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CABYRO75952 493 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CCDC166P0CW27 439 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 HADHAP40939 763 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CEP97Q8IW35 865 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 STYXQ8WUJ0 223 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 MYLPFQ96A32 169 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CNDP1Q96KN2 507 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 RTP3Q9BQQ7 232 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 CENPFP49454 3210 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 A0A0J9YVX5 310 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 TMCC1O94876 653 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 VAPBO95292 243 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 PGK1P00558 417 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 THRAP10827 490 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 HPCAP84074 193 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 PKN3Q6P5Z2 889 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 ACAD11Q709F0 780 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 LINC00523Q86TU6 105 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 IPMKQ8NFU5 416 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 DQX1Q8TE96 717 aaKnown RBP17.76■□□□□ 0.43
TNXB-205ENST00000486148 MARK4Q96L34 752 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 TBL1YQ9BQ87 522 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 XPR1Q9UBH6 696 aa17.76■□□□□ 0.43
TNXB-205ENST00000486148 RGSL1A5PLK6 1076 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 DLX3O60479 287 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 DDHD2O94830 711 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 THP07101 528 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 DLG1Q12959 904 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 SLC12A1Q13621 1099 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 PCID2Q5JVF3 399 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 DENND5AQ6IQ26 1287 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 LRRC8EQ6NSJ5 796 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ESRP1Q6NXG1 681 aaKnown RBP17.75■□□□□ 0.43
TNXB-205ENST00000486148 DUS1LQ6P1R4 473 aaKnown RBP17.75■□□□□ 0.43
TNXB-205ENST00000486148 SPNS2Q8IVW8 549 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ARHGAP12Q8IWW6 846 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 KLHDC8BQ8IXV7 354 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 TSNARE1Q96NA8 513 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 CATSPER2Q96P56 530 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 TSGA13Q96PP4 275 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 FAM105AQ9NUU6 356 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 NSMCE4AQ9NXX6 385 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 SLC2A6Q9UGQ3 507 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 UQCRBP14927 111 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 BDNFP23560 247 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ARNTP27540 789 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 NSUN2Q08J23 767 aaKnown RBP eCLIP17.75■□□□□ 0.43
TNXB-205ENST00000486148 CCL14Q16627 93 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 TIGD5Q53EQ6 642 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 DSELQ8IZU8 1212 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 NXNL1Q96CM4 212 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 GPR78Q96P69 363 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 OMDQ99983 421 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ZNF385DQ9H6B1 395 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 SCNN1GP51170 649 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ZNF135P52742 658 aaPredicted RBP17.75■□□□□ 0.43
TNXB-205ENST00000486148 PRKAA1Q13131 559 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 MYLKQ15746 1914 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
TNXB-205ENST00000486148 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
TNXB-205ENST00000486148 TSTD2Q5T7W7 516 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 FICDQ9BVA6 458 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
TNXB-205ENST00000486148 ARCN1P48444 511 aaKnown RBP17.74■□□□□ 0.43
TNXB-205ENST00000486148 MAP7Q14244 749 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 CNTN4Q8IWV2 1026 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 KYQ8NBH2 561 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 RCN3Q96D15 328 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 PARK7Q99497 189 aaKnown RBP17.74■□□□□ 0.43
TNXB-205ENST00000486148 TMLHEQ9NVH6 421 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 CIDEBQ9UHD4 219 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 ACOT9Q9Y305 439 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 AAR2Q9Y312 384 aaKnown RBP17.74■□□□□ 0.43
TNXB-205ENST00000486148 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
TNXB-205ENST00000486148 FAM95CA0A1B0GW59 222 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 TMEM233B4DJY2 109 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 AP3B1O00203 1094 aa17.74■□□□□ 0.43
TNXB-205ENST00000486148 CASQ2O14958 399 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms