RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 BECN2A8MW95 431 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 RNF103O00237 685 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 MUSKO15146 869 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 WISP1O95388 367 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ERBB2P04626 1255 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ITGA2BP08514 1039 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 DEUP1Q05D60 604 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 SPIDRQ14159 915 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 KIAA1614Q5VZ46 1190 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ESRP1Q6NXG1 681 aaKnown RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 XKR5Q6UX68 686 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 CLEC14AQ86T13 490 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ZNF683Q8IZ20 524 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 DENND6BQ8NEG7 585 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 PGAP3Q96FM1 320 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 PRR11Q96HE9 360 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 CCNL2Q96S94 520 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 KLF6Q99612 283 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 BOCQ9BWV1 1114 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 SLC13A1Q9BZW2 595 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 APOBEC3BQ9UH17 382 aaKnown RBP16.47■□□□□ 0.23
PDE6D-205ENST00000486044 KLF15Q9UIH9 416 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 CTNND2Q9UQB3 1225 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 MAST4O15021 2626 aa16.47■□□□□ 0.23
PDE6D-205ENST00000486044 IGLV3-10A0A075B6K4 115 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 LMO7DNF2Z398 122 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 ZNF821O75541 412 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-205ENST00000486044 ANXA6P08133 673 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 SULT1E1P49888 294 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 CCNHP51946 323 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-205ENST00000486044 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
PDE6D-205ENST00000486044 PFN3P60673 137 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 ARL13BQ3SXY8 428 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 PRRT3Q5FWE3 981 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 C6orf132Q5T0Z8 1188 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 CRTC1Q6UUV9 634 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 PLPP6Q8IY26 295 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 OR7D4Q8NG98 312 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 TBATAQ96M53 351 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 CRACR2AQ9BSW2 395 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 FAM117AQ9C073 453 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 ATP13A1Q9HD20 1204 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 HECAQ9UBI9 543 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-205ENST00000486044 APEX2Q9UBZ4 518 aa16.46■□□□□ 0.23
PDE6D-205ENST00000486044 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-205ENST00000486044 CXorf51AA0A1B0GTR3 108 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 TMX2-CTNND1H3BSU7 103 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ARHGAP6O43182 974 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 SRGAP2O75044 1071 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ETFBP38117 255 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 YPEL5P62699 121 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 EIF2B5Q13144 721 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 PAK1Q13153 545 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 CLN3Q13286 438 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 EIF3IQ13347 325 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 PERM1Q5SV97 790 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 FAXCQ5TGI0 409 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 GJB7Q6PEY0 223 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 GBP6Q6ZN66 633 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 PARS2Q7L3T8 475 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 PRICKLE2Q7Z3G6 844 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 RYBPQ8N488 228 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 SCG3Q8WXD2 468 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 SHC3Q92529 594 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ISG20Q96AZ6 181 aaKnown RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 CCDC3Q9BQI4 270 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 C1QTNF7Q9BXJ2 289 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ZYG11BQ9C0D3 744 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 SYNDIG1Q9H7V2 258 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ANLNQ9NQW6 1124 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 WDR70Q9NW82 654 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 ATXN7L1Q9ULK2 861 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-205ENST00000486044 PADI4Q9UM07 663 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 SNX10Q9Y5X0 201 aa16.45■□□□□ 0.22
PDE6D-205ENST00000486044 TOR1BO14657 336 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 SPINT1O43278 529 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 GJB6O95452 261 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 CSRP3P50461 194 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 STX17P56962 302 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
PDE6D-205ENST00000486044 GNA12Q03113 381 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 SLC25A52Q3SY17 297 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 ZNF805Q5CZA5 627 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 OTUD1Q5VV17 481 aaPredicted RBP16.44■□□□□ 0.22
PDE6D-205ENST00000486044 CREBRFQ8IUR6 639 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 SLC35F3Q8IY50 421 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 PHACTR4Q8IZ21 702 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
PDE6D-205ENST00000486044 STRADBQ9C0K7 418 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms