RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RSPH14Q9UHP6 348 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 TTC24A2A3L6 582 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 TARSL2A2RTX5 802 aaKnown RBP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 FAM187AA6NFU0 413 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 RAD51CO43502 376 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 IGSF6O95976 241 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 EPHX1P07099 455 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 NFKB1P19838 968 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 CES1P23141 567 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 RECQLP46063 649 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 SCNN1BP51168 640 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 MRPS25P82663 173 aaKnown RBP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 DSC2Q02487 901 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 NIPAL4Q0D2K0 466 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 PTK6Q13882 451 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 PARP6Q2NL67 630 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 C9orf64Q5T6V5 341 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 TRIM67Q6ZTA4 783 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 SRLQ86TD4 932 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 TXNDC5Q8NBS9 432 aaKnown RBP17.82■□□□□ 0.44
CHMP3-207ENST00000485465 LRRN4CLQ8ND94 238 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 PJA1Q8NG27 643 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 OR2A12Q8NGT7 310 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 ARRDC2Q8TBH0 407 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 FCRL5Q96RD9 977 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 GABRG3Q99928 467 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 SEMA3CQ99985 751 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
CHMP3-207ENST00000485465 INSIG1O15503 277 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 BNIP3LO60238 219 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 ADAM23O75077 832 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 SIN3BO75182 1162 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 GJB3O75712 270 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 METTL18O95568 372 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 ALADP13716 330 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 MYLK3Q32MK0 819 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 RALGPS1Q5JS13 557 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 C8orf74Q6P047 294 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 NCEH1Q6PIU2 408 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 DPY19L3Q6ZPD9 716 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 Q6ZS52 159 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 RYBPQ8N488 228 aaPredicted RBP17.81■□□□□ 0.44
CHMP3-207ENST00000485465 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 IMP4Q96G21 291 aaKnown RBP17.81■□□□□ 0.44
CHMP3-207ENST00000485465 LRRC1Q9BTT6 524 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 PRSS16Q9NQE7 514 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 HECAQ9UBI9 543 aaPredicted RBP17.81■□□□□ 0.44
CHMP3-207ENST00000485465 EVLQ9UI08 416 aaPredicted RBP17.81■□□□□ 0.44
CHMP3-207ENST00000485465 F5P12259 2224 aa17.81■□□□□ 0.44
CHMP3-207ENST00000485465 CHURC1-FNTBB4DL54 471 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 F5H423 210 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 SYNCRIPO60506 623 aaKnown RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 SLU7O95391 586 aaKnown RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 POP4O95707 220 aaKnown RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 MMP2P08253 660 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 PSMB4P28070 264 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 FDFT1P37268 417 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 MAPK8P45983 427 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 VPS41P49754 854 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 CCNHP51946 323 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 AP1S1P61966 158 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 GPS1Q13098 491 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 PRPSAP1Q14558 356 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 EOGTQ5NDL2 527 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 PKN3Q6P5Z2 889 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 PRPF39Q86UA1 669 aaKnown RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 TAB3Q8N5C8 712 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 CHST14Q8NCH0 376 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 FLCNQ8NFG4 579 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 OR6K2Q8NGY2 324 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 CLDN23Q96B33 292 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 RBM15Q96T37 977 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 GORASP1Q9BQQ3 440 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 TRIM51Q9BSJ1 452 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 MFSD1Q9H3U5 465 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 MMP17Q9ULZ9 603 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 SIT1Q9Y3P8 196 aa17.8■□□□□ 0.44
CHMP3-207ENST00000485465 FARP1Q9Y4F1 1045 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-207ENST00000485465 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 RIOK3O14730 519 aaKnown RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 HOXB2P14652 356 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 CD86P42081 329 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 SKOR1P84550 965 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 RAD51Q06609 339 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 CAMK2GQ13555 558 aaPredicted RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 IHHQ14623 411 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 GLE1Q53GS7 698 aaKnown RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 FAXCQ5TGI0 409 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 STK40Q8N2I9 435 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 SPATA22Q8NHS9 363 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 TADA1Q96BN2 335 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 OXNAD1Q96HP4 312 aaPredicted RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 PPP1R2P1Q96PQ5 205 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 HEPHQ9BQS7 1158 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 CPEB1Q9BZB8 566 aaKnown RBP17.79■□□□□ 0.44
CHMP3-207ENST00000485465 ETNK1Q9HBU6 452 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 RAB6BQ9NRW1 208 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms