RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SEMA3CQ99985 751 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 MUC3BQ9H195 1237 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 MRM3Q9HC36 420 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 PCMTD2Q9NV79 361 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 FGFR1OP2Q9NVK5 253 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 UBA2Q9UBT2 640 aaPredicted RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 MUSKO15146 869 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 ITGA2BP08514 1039 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 GLDCP23378 1020 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 CLCN4P51793 760 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 DNAJC3Q13217 504 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 ZKSCAN8Q15776 578 aaPredicted RBP16.93■□□□□ 0.3
CTSA-207ENST00000484855 PDK4Q16654 411 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 GRTP1Q5TC63 336 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 RNF219Q5W0B1 726 aaPredicted RBP16.93■□□□□ 0.3
CTSA-207ENST00000484855 PDPK2PQ6A1A2 396 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 CXorf57Q6NSI4 855 aaKnown RBP16.93■□□□□ 0.3
CTSA-207ENST00000484855 CARNMT1Q8N4J0 409 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 TADA1Q96BN2 335 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 SEC16BQ96JE7 1060 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 C12orf65Q9H3J6 166 aaKnown RBP16.93■□□□□ 0.3
CTSA-207ENST00000484855 ARNT2Q9HBZ2 717 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 SEPT3Q9UH03 358 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 ACTL7AQ9Y615 435 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 ANKRD36A6QL64 1941 aa16.93■□□□□ 0.3
CTSA-207ENST00000484855 TRAV19A0A0A6YYK7 116 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 H0Y626 953 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 C1RP00736 705 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 GJA1P17302 382 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 TAC1P20366 129 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SLC7A9P82251 487 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SEPT6Q14141 434 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 TEDDM1Q5T9Z0 273 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 STRA8Q7Z7C7 330 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 CACNA2D3Q8IZS8 1091 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 MICAL1Q8TDZ2 1067 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SRPK1Q96SB4 655 aaKnown RBP16.92■□□□□ 0.3
CTSA-207ENST00000484855 AGAP2Q99490 1192 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 CINPQ9BW66 212 aaPredicted RBP16.92■□□□□ 0.3
CTSA-207ENST00000484855 ACE2Q9BYF1 805 aaPredicted RBP16.92■□□□□ 0.3
CTSA-207ENST00000484855 IARS2Q9NSE4 1012 aaKnown RBP16.92■□□□□ 0.3
CTSA-207ENST00000484855 MKS1Q9NXB0 559 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 ALADP13716 330 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SERPINH1P50454 418 aaKnown RBP16.92■□□□□ 0.3
CTSA-207ENST00000484855 UBE3AQ05086 875 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 IHHQ14623 411 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 STXBP5Q5T5C0 1151 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 LRRC8CQ8TDW0 803 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 FAM111AQ96PZ2 611 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 RBBP8Q99708 897 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 MGME1Q9BQP7 344 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 SLC13A1Q9BZW2 595 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 PRKAG3Q9UGI9 489 aa16.92■□□□□ 0.3
CTSA-207ENST00000484855 CBX4O00257 560 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 NRG2O14511 850 aaPredicted RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 GJB3O75712 270 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 RFTN1Q14699 578 aaPredicted RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 ALG1LQ6GMV1 187 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ZNF783Q6ZMS7 281 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 SPATS2Q86XZ4 545 aaKnown RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 FAM217AQ8IXS0 508 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 TMA16Q96EY4 203 aaKnown RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 LBHD1Q9BQE6 289 aaPredicted RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 MAN1C1Q9NR34 630 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 GOLGA8TH3BQL2 631 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 TPP1O14773 563 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 LUC7L3O95232 432 aaKnown RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 PAMP19021 973 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 ETV4P43268 484 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 PDE1BQ01064 536 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ARMC3Q5W041 872 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ESRP1Q6NXG1 681 aaKnown RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 RGS9BPQ6ZS82 235 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 CDHR3Q6ZTQ4 885 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 MICALCLQ6ZW33 695 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 SPRED2Q7Z698 418 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 PIGWQ7Z7B1 504 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ACMSDQ8TDX5 336 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 IFT43Q96FT9 208 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 PSKH2Q96QS6 385 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ELAC2Q9BQ52 826 aaKnown RBP16.91■□□□□ 0.3
CTSA-207ENST00000484855 HCFC1R1Q9NWW0 138 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 NSMCE4AQ9NXX6 385 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 ZNF510Q9Y2H8 683 aa16.91■□□□□ 0.3
CTSA-207ENST00000484855 HEATR9A2RTY3 570 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 WDR91A4D1P6 747 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 C5orf67F2Z3F1 127 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 GFRA2O00451 464 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 ALDOAP04075 364 aaKnown RBP16.9■□□□□ 0.3
CTSA-207ENST00000484855 SERPINF2P08697 491 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 PFKLP17858 780 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 LIMK2P53671 638 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 CSE1LP55060 971 aaKnown RBP16.9■□□□□ 0.3
CTSA-207ENST00000484855 SIRPB2Q5JXA9 342 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms