RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 HSPA13P48723 471 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 GRM1Q13255 1194 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 INSCQ1MX18 579 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 MOB2Q70IA6 237 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 ZNF410Q86VK4 478 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 DCBLD1Q8N8Z6 715 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 ALG9Q9H6U8 611 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 POLR1BQ9H9Y6 1135 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 OXSMQ9NWU1 459 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CLOCKO15516 846 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 CCDC166P0CW27 439 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 GFAPP14136 432 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 DPP6P42658 865 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 YWHAHQ04917 246 aaPredicted RBP12.86□□□□□ -0.35
VPS52-218ENST00000482399 TRAF2Q12933 501 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 NAPEPLDQ6IQ20 393 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 MARVELD2Q8N4S9 558 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 OR52K2Q8NGK3 314 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
VPS52-218ENST00000482399 PIGVQ9NUD9 493 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 PHF24Q9UPV7 400 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 UBA6A0AVT1 1052 aaPredicted RBP12.86□□□□□ -0.35
VPS52-218ENST00000482399 TRPC5OSA6NMA1 111 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 PCNAP12004 261 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 TAS2R39P59534 338 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 ITGA7Q13683 1181 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 METTL21CQ5VZV1 264 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 CPNE9Q8IYJ1 553 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 ANKRD52Q8NB46 1076 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 TBC1D23Q9NUY8 699 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 ZDHHC7Q9NXF8 308 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 SLC2A6Q9UGQ3 507 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 BTRCQ9Y297 605 aa12.86□□□□□ -0.35
VPS52-218ENST00000482399 J3QRK9 145 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 NRP1O14786 923 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 CABYRO75952 493 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 AHSGP02765 367 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 MLNP12872 115 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 OAZ1P54368 228 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 CDH17Q12864 832 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 TMEM110Q86TL2 294 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 TKTL2Q9H0I9 626 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 MTMR10Q9NXD2 777 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 C7orf72A4D263 438 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 EEF1DP29692 281 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 MAXP61244 160 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 TRIM25Q14258 630 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 CYP51A1Q16850 503 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 KLHL35Q6PF15 583 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 SLC26A9Q7LBE3 791 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PATL1Q86TB9 770 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 AHI1Q8N157 1196 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 MTG1Q9BT17 334 aaPredicted RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 EBF1Q9UH73 591 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 CDC14AQ9UNH5 594 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 ERI2A8K979 691 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 HACD1B0YJ81 288 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PLOD2O00469 737 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 H6PDO95479 791 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 GNAO1P09471 354 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 TGFB3P10600 412 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 NCK1P16333 377 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 CHRM3P20309 590 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 CCNA1P78396 465 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PIGGQ5H8A4 983 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 DRC3Q9H069 523 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 ARMC7Q9H6L4 198 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 SPAG4Q9NPE6 437 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 MKS1Q9NXB0 559 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
VPS52-218ENST00000482399 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
VPS52-218ENST00000482399 H3BRB1 525 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 BEST1O76090 585 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 AP2A1O95782 977 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 PIRTP0C851 137 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 CDH2P19022 906 aaPredicted RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 NDST2P52849 883 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 DLG3Q92796 817 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS52-218ENST00000482399 WNT8BQ93098 351 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms