RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 HSPA9P38646 679 aaKnown RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 ADPRHP54922 357 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 GALNT2Q10471 571 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 CNTN1Q12860 1018 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 TFDP2Q14188 446 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 ZNF235Q14590 738 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 LBRQ14739 615 aaKnown RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 DCAF12L1Q5VU92 463 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 TIGD7Q6NT04 549 aaPredicted RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 ERN2Q76MJ5 926 aaKnown RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 TP53INP2Q8IXH6 220 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 KATNAL2Q8IYT4 538 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 PQLC3Q8N755 202 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 C12orf50Q8NA57 414 aaPredicted RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 CEP76Q8TAP6 659 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 SNX19Q92543 992 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 RBM41Q96IZ5 413 aaKnown RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 HDAC8Q9BY41 377 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 C6orf106Q9H6K1 298 aaPredicted RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 HAUS2Q9NVX0 235 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 LHX3Q9UBR4 397 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 PILRBQ9UKJ0 227 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 FAM186AA6NE01 2351 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 CEP192Q8TEP8 1941 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 MYO15AQ9UKN7 3530 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 C3orf70A6NLC5 250 aaPredicted RBP20.78■□□□□ 0.92
VARS-224ENST00000479051 MAFKO60675 156 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 FSBPO95073 299 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 CCDC175P0C221 793 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 GARSP41250 739 aaKnown RBP20.78■□□□□ 0.92
VARS-224ENST00000479051 NEK3P51956 506 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 METAP1P53582 386 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 PLA2G2CQ5R387 149 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 KIAA0895LQ68EN5 471 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 NCEH1Q6PIU2 408 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 RNF10Q8N5U6 811 aaKnown RBP20.78■□□□□ 0.92
VARS-224ENST00000479051 FAM131CQ96AQ9 280 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 ARRDC3Q96B67 414 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 EXOC2Q96KP1 924 aa20.78■□□□□ 0.92
VARS-224ENST00000479051 EVLQ9UI08 416 aaPredicted RBP20.78■□□□□ 0.92
VARS-224ENST00000479051 RALGAPA1Q6GYQ0 2036 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3DA0A087WVF3 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3IA0A087WXS9 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3EA0A087X179 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3KA0A087X1G2 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 CCDC66A2RUB6 948 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3FA6NER0 549 aaPredicted RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3LB9A6J9 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 PLK4O00444 970 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 KHNYNO15037 678 aaKnown RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 PLRG1O43660 514 aaKnown RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 UGT2B4P06133 528 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3HP0C7X1 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 CTNNA1P35221 906 aaKnown RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 MAPK8P45983 427 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 NSUN2Q08J23 767 aaKnown RBP eCLIP20.77■□□□□ 0.92
VARS-224ENST00000479051 CCDC6Q16204 474 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 DUOXA1Q1HG43 343 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 ZNF805Q5CZA5 627 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TFDP3Q5H9I0 405 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 MARC1Q5VT66 337 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 AGBL4Q5VU57 503 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 SLC9A4Q6AI14 798 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3GQ6DHY5 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3CQ6IPX1 549 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 MFSD7Q6UXD7 560 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 GDPD4Q6W3E5 623 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 BZW1Q7L1Q6 419 aaKnown RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 KIAA2013Q8IYS2 634 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 TBC1D3Q8IZP1 549 aaPredicted RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 EXD1Q8NHP7 514 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 DNASE2BQ8WZ79 361 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 PSKH2Q96QS6 385 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 CPEB1Q9BZB8 566 aaKnown RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 MIR1-1HGQ9H1L0 117 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 PREBQ9HCU5 417 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 PARD6AQ9NPB6 346 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 AMFRQ9UKV5 643 aa20.77■□□□□ 0.92
VARS-224ENST00000479051 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.77■□□□□ 0.92
VARS-224ENST00000479051 ATXN2Q99700 1313 aaKnown RBP20.77■□□□□ 0.91
VARS-224ENST00000479051 EP300Q09472 2414 aaPredicted RBP20.76■□□□□ 0.91
VARS-224ENST00000479051 GRID2IPA4D2P6 1211 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 NEBLO76041 1014 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 GKP32189 559 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 CETN2P41208 172 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 CDKN2BP42772 138 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 MMP13P45452 471 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 CSNK1DP48730 415 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 CCR5P51681 352 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 LMNB2Q03252 620 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 GBE1Q04446 702 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 SLC10A7Q0GE19 358 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 CFAP58Q5T655 872 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PIP5KL1Q5T9C9 394 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PEAR1Q5VY43 1037 aaPredicted RBP20.76■□□□□ 0.91
VARS-224ENST00000479051 SPOCD1Q6ZMY3 1216 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PRR23CQ6ZRP0 262 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms