RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF84P51523 738 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC37A1P57057 533 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 DMWDQ09019 674 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PRTGQ2VWP7 1150 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 DSTYKQ6XUX3 929 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PELI3Q8N2H9 469 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 EXD3Q8N9H8 876 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 LSM14AQ8ND56 463 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PIGKQ92643 395 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 FUZQ9BT04 418 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PHF7Q9BWX1 381 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PAIP1Q9H074 479 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 TAOK3Q9H2K8 898 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 STN1Q9H668 368 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 SFXN1Q9H9B4 322 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 MRPL44Q9H9J2 332 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 MAP3K20Q9NYL2 800 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 HSF4Q9ULV5 492 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 COG5Q9UP83 839 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 NKTRP30414 1462 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 SETBP1Q9Y6X0 1596 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 HFM1A2PYH4 1435 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM90A7PA6NKC0 464 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM90A23PA8MXZ1 464 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 GTPBP1O00178 669 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 PEX12O00623 359 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 GUCY1B2O75343 617 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 TMEM63AO94886 807 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 SGPL1O95470 568 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 TNFRSF1BP20333 461 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 CAPN3P20807 821 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 PRPH2P23942 346 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 CDC25AP30304 524 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 PGM1P36871 562 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 EIF5P55010 431 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 EARS2Q5JPH6 523 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 UBAP2Q5T6F2 1119 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC9C2Q5TAH2 1124 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 ACAD10Q6JQN1 1059 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM180BQ6P0A1 224 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 B4GALNT4Q76KP1 1039 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 UBE2Q1Q7Z7E8 422 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 TCP11L2Q8N4U5 519 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 HDAC2Q92769 488 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 ATP2A3Q93084 1043 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 SH3KBP1Q96B97 665 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 RNF125Q96EQ8 232 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 CAMK1GQ96NX5 476 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 FCRL5Q96RD9 977 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 GATA5Q9BWX5 397 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 CLPBQ9H078 707 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 IL21RQ9HBE5 538 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 THAP1Q9NVV9 213 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 CNOT7Q9UIV1 285 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 HEMK1Q9Y5R4 338 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-212ENST00000478573 NPHP4O75161 1426 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 TCF20Q9UGU0 1960 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 NEXMIFQ5QGS0 1516 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC22A23A1A5C7 686 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 NPIPB13A6NJU9 1138 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 C16orf96A6NNT2 1141 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 NPIPB5A8MRT5 1133 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 NPIPB4C9JG80 1138 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 ANP32CO43423 234 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 CNTN5O94779 1100 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 TBX18O95935 607 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 RFPL3SP0C7P2 107 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 ARSAP15289 507 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 MAN1A1P33908 653 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 GPD2P43304 727 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 RPS6KA3P51812 740 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 MVDP53602 400 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 HSPA2P54652 639 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 B4GALNT1Q00973 533 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 PPATQ06203 517 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 MTA1Q13330 715 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 GPR68Q15743 365 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 PRICKLE4Q2TBC4 344 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 RUNDC3AQ59EK9 446 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 FAM57BQ71RH2 274 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 RTL10Q7L3V2 364 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 TBC1D1Q86TI0 1168 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 RFX6Q8HWS3 928 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 SCN4BQ8IWT1 228 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 TMEM199Q8N511 208 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 WIPF2Q8TF74 440 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 ASB5Q8WWX0 329 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 STAMQ92783 540 aa4.38□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZUFSPQ96AP4 578 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms