RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LHX3Q9UBR4 397 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 LCMT1Q9UIC8 334 aa15.84■□□□□ 0.13
HMGA1-206ENST00000478214 A0A1W2PPC4 97 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 LCA5LO95447 670 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 POP4O95707 220 aaKnown RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 CSNK1EP49674 416 aaKnown RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 ATXN3P54252 364 aaPredicted RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 BNC1Q01954 994 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 GRIK2Q13002 908 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 DPYSL3Q14195 570 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 TMCO3Q6UWJ1 677 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 ERN2Q76MJ5 926 aaKnown RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 CCDC170Q8IYT3 715 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 PPP1R16AQ96I34 528 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 EXOC2Q96KP1 924 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 GDAP1L1Q96MZ0 367 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 HDAC8Q9BY41 377 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 KDM4CQ9H3R0 1056 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 SP110Q9HB58 689 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 RCOR3Q9P2K3 495 aaPredicted RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 IPO11Q9UI26 975 aaKnown RBP15.83■□□□□ 0.12
HMGA1-206ENST00000478214 TFR2Q9UP52 801 aa15.83■□□□□ 0.12
HMGA1-206ENST00000478214 A0A1B0GVT2 93 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 SOWAHDA6NJG2 315 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 TM4SF5O14894 197 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 LATO43561 262 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 IGSF6O95976 241 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 UGT2B4P06133 528 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 SYPP08247 313 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 KRT7P08729 469 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 FECHP22830 423 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 ITGB7P26010 798 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 MAT2AP31153 395 aaKnown RBP15.82■□□□□ 0.12
HMGA1-206ENST00000478214 CYLC1P35663 651 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-206ENST00000478214 ARHGAP25P42331 645 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 AFF3P51826 1226 aaKnown RBP15.82■□□□□ 0.12
HMGA1-206ENST00000478214 NEK3P51956 506 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 IL10RBQ08334 325 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 CCDC15Q0P6D6 951 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 TCEAL1Q15170 157 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 UAP1L1Q3KQV9 507 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 LAYNQ6UX15 382 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 PARS2Q7L3T8 475 aaKnown RBP15.82■□□□□ 0.12
HMGA1-206ENST00000478214 DGLUCYQ7Z3D6 616 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 MINDY1Q8N5J2 469 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 KCTD6Q8NC69 237 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 LRIG1Q96JA1 1093 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 SLC6A18Q96N87 628 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 CALN1Q9BXU9 219 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 PREBQ9HCU5 417 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 PCDHA13Q9Y5I0 950 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 CACNA1EQ15878 2313 aa15.82■□□□□ 0.12
HMGA1-206ENST00000478214 C16orf96A6NNT2 1141 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 WNT9AO14904 365 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 INSIG1O15503 277 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 PALMO75781 387 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 ADRB3P13945 408 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 RACK1P63244 317 aaKnown RBP15.81■□□□□ 0.12
HMGA1-206ENST00000478214 PDK2Q15119 407 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 SPA17Q15506 151 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 ZNF805Q5CZA5 627 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 ZFYVE27Q5T4F4 411 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 FBXL19Q6PCT2 694 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 GDPD4Q6W3E5 623 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 TRIM69Q86WT6 500 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 TMTC1Q8IUR5 882 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 TSEN2Q8NCE0 465 aaKnown RBP15.81■□□□□ 0.12
HMGA1-206ENST00000478214 PCDH19Q8TAB3 1148 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 RAPGEF5Q92565 580 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 KLHL32Q96NJ5 620 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 ZNF670Q9BS34 389 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 HYOU1Q9Y4L1 999 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 EPN1Q9Y6I3 576 aaPredicted RBP15.81■□□□□ 0.12
HMGA1-206ENST00000478214 CACNA1AO00555 2505 aa15.81■□□□□ 0.12
HMGA1-206ENST00000478214 SPTBN2O15020 2390 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 KNL1Q8NG31 2342 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 PCDH15Q96QU1 1955 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 A0A1W2PQU0 124 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 RNGTTO60942 597 aaKnown RBP15.8■□□□□ 0.12
HMGA1-206ENST00000478214 NDUFA10O95299 355 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 CDC25BP30305 580 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 SERPINB6P35237 376 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 NOP2P46087 812 aaKnown RBP15.8■□□□□ 0.12
HMGA1-206ENST00000478214 RGRP47804 291 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 GRIA4P48058 902 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 RAD51Q06609 339 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 TEAD4Q15561 434 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 KIF19Q2TAC6 998 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 ANKRD20A8PQ5CZ79 823 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 RAD9BQ6WBX8 426 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 PRPF39Q86UA1 669 aaKnown RBP15.8■□□□□ 0.12
HMGA1-206ENST00000478214 MAP7D3Q8IWC1 876 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 SPC24Q8NBT2 197 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 KLK6Q92876 244 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 SERAC1Q96JX3 654 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 OSBPL1AQ9BXW6 950 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 ZDHHC5Q9C0B5 715 aa15.8■□□□□ 0.12
HMGA1-206ENST00000478214 TPX2Q9ULW0 747 aaKnown RBP15.8■□□□□ 0.12
HMGA1-206ENST00000478214 FADS3Q9Y5Q0 445 aa15.8■□□□□ 0.12
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