RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SERAC1Q96JX3 654 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TNIP3Q96KP6 325 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SIGLEC10Q96LC7 697 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 C7orf26Q96N11 449 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SPATA13Q96N96 652 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ZMAT2Q96NC0 199 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NECAB3Q96P71 396 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CSPG4P5Q96PW8 444 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SRPK1Q96SB4 655 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 KLF6Q99612 283 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 EBNA1BP2Q99848 306 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 LBHD1Q9BQE6 289 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NAT9Q9BTE0 207 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TBC1D10AQ9BXI6 508 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TMEM120AQ9BXJ8 343 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TRIM6Q9C030 488 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CEP44Q9C0F1 390 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RAB6CQ9H0N0 254 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SNX25Q9H3E2 840 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ABHD16BQ9H3Z7 469 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RNPEPL1Q9HAU8 725 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 FAM49BQ9NUQ9 324 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 GDAP2Q9NXN4 497 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TUBGCP4Q9UGJ1 667 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 HAO1Q9UJM8 370 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PLLPQ9Y342 182 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NME7Q9Y5B8 376 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RAD54BQ9Y620 910 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NUP205Q92621 2012 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 MYO16Q9Y6X6 1858 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CCL15-CCL14A0A0B4J2E2 113 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 A0A0G2JND7 137 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 A8MUI8 341 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CXorf49A8MYA2 514 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PRR33A8MZF0 331 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KPNA7A9QM74 516 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PDHXO00330 501 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PPP1R12AO14974 1030 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 OPHN1O60890 802 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 HUS1O60921 280 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PEX11AO75192 247 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GLRA3O75311 464 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 AVILO75366 819 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GPR32O75388 356 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 RFPL1O75677 317 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ALDH1A2O94788 518 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 METTL18O95568 372 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 F2P00734 622 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CSH1P0DML2 217 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CSH2P0DML3 217 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SMIM10L2AP0DMW4 78 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SMIM10L2BP0DMW5 78 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CYP2C9P11712 490 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 LCP1P13796 627 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC130P13994 396 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CALB2P22676 271 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ITPKAP23677 461 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ADORA2BP29275 332 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CRHR1P34998 444 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GNL1P36915 607 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MATKP42679 507 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GLUD2P49448 558 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SULT1E1P49888 294 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GTF2A2P52657 109 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF135P52742 658 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 AIF1P55008 147 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GBE1Q04446 702 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 OVGP1Q12889 678 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SLC10A2Q12908 348 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MTM1Q13496 603 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PAFAH1B3Q15102 231 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PDK1Q15118 436 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 TBCCQ15814 346 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CCL15Q16663 113 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KIZQ2M2Z5 673 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SOWAHAQ2M3V2 549 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SLC25A52Q3SY17 297 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CMPK2Q5EBM0 449 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 FAXCQ5TGI0 409 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD20A3Q5VUR7 823 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 NCBP2-AS2Q69YL0 99 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 LRRC8BQ6P9F7 803 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF449Q6P9G9 518 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KYAT3Q6YP21 454 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC81Q6ZN84 652 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PDZD4Q76G19 769 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF534Q76KX8 674 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 LIMS2Q7Z4I7 341 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GPR142Q7Z601 462 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PLEKHH3Q7Z736 793 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 DPP9Q86TI2 863 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PRPF39Q86UA1 669 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MTDHQ86UE4 582 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CRLF3Q8IUI8 442 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 NUDCD3Q8IVD9 361 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SPACA3Q8IXA5 215 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ADGRF2Q8IZF7 708 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms