RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MYLPFQ96A32 169 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 NEIL1Q96FI4 390 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 C1orf159Q96HA4 380 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 EPSTI1Q96J88 318 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 ACOX2Q99424 681 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 CBWD1Q9BRT8 395 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 FAM213AQ9BRX8 229 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 TBC1D7Q9P0N9 293 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 KCNG1Q9UIX4 513 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 TMA7Q9Y2S6 64 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SNX9Q9Y5X1 595 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 CPQQ9Y646 472 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 IGHV1OR15-9A0A0B4J2B8 117 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 A0A1W2PQU0 124 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TCRBV21S2A2A0A5A6 115 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF839A8K0R7 811 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 WASH3PC4AMC7 463 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 F8VP50 259 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 H0YCG3 227 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CLDN5O00501 218 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 SH3BP5O60239 455 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 HUS1O60921 280 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CBFA2T3O75081 653 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TULP3O75386 442 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 IL18RAPO95256 599 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 NFATC1O95644 943 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CR2P20023 1033 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 DDIT3P35638 169 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 WASP42768 502 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 RPL10AP62906 217 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 MYL7Q01449 175 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 POU5F1Q01860 360 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 BNC1Q01954 994 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TAF10Q12962 218 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 KCNB1Q14721 858 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 COL28A1Q2UY09 1125 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 RILPL1Q5EBL4 403 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 LY6G5CQ5SRR4 150 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 L1TD1Q5T7N2 865 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 EGFLAMQ63HQ2 1017 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 DENND5AQ6IQ26 1287 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 DENND5BQ6ZUT9 1274 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 PAQR9Q6ZVX9 377 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 LPCAT2Q7L5N7 544 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TMEM25Q86YD3 366 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 SPATA2LQ8IUW3 424 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TMEM86AQ8N2M4 240 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 LRRC52Q8N7C0 313 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 SCAMP5Q8TAC9 235 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 MDM1Q8TC05 714 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 POMGNT1Q8WZA1 660 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 LARP4BQ92615 738 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 PCED1BQ96HM7 432 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 FUBP3Q96I24 572 aaKnown RBP eCLIP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CDK5RAP3Q96JB5 506 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 ZSCAN31Q96LW9 406 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF560Q96MR9 790 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 PNKPQ96T60 521 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 SYT15Q9BQS2 421 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 MRPL45Q9BRJ2 306 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 NUSAP1Q9BXS6 441 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 B3GNT5Q9BYG0 378 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 C12orf65Q9H3J6 166 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 DPEP3Q9H4B8 488 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 ZHX3Q9H4I2 956 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 PCIF1Q9H4Z3 704 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 ARHGEF4Q9NR80 690 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 KCND1Q9NSA2 647 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 INTS13Q9NVM9 706 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 AURKAIP1Q9NWT8 199 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CALCOCO1Q9P1Z2 691 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 CFAP97Q9P2B7 532 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 SLCO1B1Q9Y6L6 691 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 RP1P56715 2156 aa4.85□□□□□ -1.63
CKS1B-207ENST00000477676 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
CKS1B-207ENST00000477676 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 FRMD3A2A2Y4 597 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 PRRT4C9JH25 899 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 PRODHO43272 600 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 COCHO43405 550 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SLC26A4O43511 780 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 DLX3O60479 287 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 PRPF6O94906 941 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 APODP05090 189 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CFIP05156 583 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SERPINF2P08697 491 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ZDHHC11BP0C7U3 371 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 COL6A2P12110 1019 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SCP2P22307 547 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 WARSP23381 471 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms