RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 FEM1CQ96JP0 617 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 RPRD1AQ96P16 312 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-203ENST00000477626 GPR78Q96P69 363 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 AGAP2Q99490 1192 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 GDF15Q99988 308 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 VPS37BQ9H9H4 285 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 ENTPD7Q9NQZ7 604 aa12.29□□□□□ -0.44
PRPF39-203ENST00000477626 CCDC85CA6NKD9 419 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 LEFTY2O00292 366 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 RFPL2O75678 378 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 MZF1P28698 734 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 CSNK1DP48730 415 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SLC11A2P49281 568 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ZNF140P52738 457 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 RBBP8Q99708 897 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SEPT10Q9P0V9 454 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PRKAG2Q9UGJ0 569 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SLC2A6Q9UGQ3 507 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SMG5Q9UPR3 1016 aaKnown RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 FAM47DPA6NHR8 397 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ANXA9O76027 345 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 HARS2P49590 506 aaKnown RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 WNT3AP56704 352 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 TMED2Q15363 201 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ANO4Q32M45 955 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 INO80DQ53TQ3 878 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 NCEH1Q6PIU2 408 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 CMTM8Q8IZV2 173 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 C2CD4AQ8NCU7 369 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 FIBINQ8TAL6 211 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PTPRN2Q92932 1015 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 APOPT1Q96IL0 206 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 MAN1C1Q9NR34 630 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SLC17A7Q9P2U7 560 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PRRG1O14668 218 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 KLF11O14901 512 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PRAMEF12O95522 483 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 BRAFP15056 766 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PBX2P40425 430 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PDK4Q16654 411 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 DUSP6Q16828 381 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 NAPEPLDQ6IQ20 393 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 ARFGAP2Q8N6H7 521 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 GPR150Q8NGU9 434 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 MTBPQ96DY7 904 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 TDRD1Q9BXT4 1180 aaKnown RBP12.28□□□□□ -0.44
PRPF39-203ENST00000477626 UBP1Q9NZI7 540 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 TBK1Q9UHD2 729 aa12.28□□□□□ -0.44
PRPF39-203ENST00000477626 TICRRQ7Z2Z1 1910 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GOLGA6L10A6NI86 522 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.44
PRPF39-203ENST00000477626 TM9SF1O15321 606 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GLP2RO95838 553 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GLUD1P00367 558 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 KRT4P19013 534 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 CNTFP26441 200 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GABRR2P28476 465 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 CRHR1P34998 444 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 GEMP55040 296 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 MGAT5Q09328 741 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 DNAJC3Q13217 504 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 KIAA0930Q6ICG6 404 aaPredicted RBP12.27□□□□□ -0.44
PRPF39-203ENST00000477626 PALM2Q8IXS6 379 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.44
PRPF39-203ENST00000477626 ZNF473Q8WTR7 871 aaKnown RBP12.27□□□□□ -0.44
PRPF39-203ENST00000477626 MAGEB18Q96M61 343 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 SAMD11Q96NU1 681 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 NUDCD1Q96RS6 583 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 MED16Q9Y2X0 877 aa12.27□□□□□ -0.44
PRPF39-203ENST00000477626 A0A1W2PRU2 124 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 E2F8A0AVK6 867 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 AP3B1O00203 1094 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 ATP5DP30049 168 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 CDC25CP30307 473 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 ARRB2P32121 409 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 LIMK2P53671 638 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 SETMARQ53H47 684 aaPredicted RBP12.27□□□□□ -0.45
PRPF39-203ENST00000477626 RABGAP1LQ5R372 815 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 SH3RF2Q8TEC5 729 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 USP33Q8TEY7 942 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 TRPV4Q9HBA0 871 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 PLLPQ9Y342 182 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 PPIL1Q9Y3C6 166 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 GMNCA6NCL1 334 aa12.27□□□□□ -0.45
PRPF39-203ENST00000477626 HTRA2O43464 458 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms