RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NOD2Q9HC29 1040 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CHRAC1Q9NRG0 131 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 DZANK1Q9NVP4 752 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 SEPT3Q9UH03 358 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 VPS28Q9UK41 221 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ADAM21Q9UKJ8 722 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 PDE4DIPQ5VU43 2346 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 LOC285095A0A1B0GVY8 99 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 UGT1A9O60656 530 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CDH16O75309 829 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 SPAG6O75602 509 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 FAM155BO75949 473 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ALDH1A2O94788 518 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 PGAM1P18669 254 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 FSHRP23945 695 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 WEE1P30291 646 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 RFTN1Q14699 578 aaPredicted RBP14.65□□□□□ -0.06
COL4A6-206ENST00000477085 LY6G5CQ5SRR4 150 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ANKRD54Q6NXT1 300 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 LINC00523Q86TU6 105 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 TMEM135Q86UB9 458 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 EFHBQ8N7U6 833 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ATP2A3Q93084 1043 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 PAFAH2Q99487 392 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 UGT1A7Q9HAW7 530 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 UGT1A10Q9HAW8 530 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 UGT1A8Q9HAW9 530 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ARNT2Q9HBZ2 717 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 SPHK2Q9NRA0 654 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 IL1RAPL1Q9NZN1 696 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 BFARQ9NZS9 450 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CLEC1BQ9P126 229 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 FETUBQ9UGM5 382 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ZMYM5Q9UJ78 669 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 BPTFQ12830 3046 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ZCWPW2A0A1B0GU75 182 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 FAM159BA6NKW6 160 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 NEDD8-MDP1E9PL57 170 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 TMCC1O94876 653 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 GSTA2P09210 222 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ATXN1LP0C7T5 689 aaKnown RBP14.64□□□□□ -0.07
COL4A6-206ENST00000477085 DLX2Q07687 328 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CRYMQ14894 314 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 EMC10Q5UCC4 262 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ADGRD1Q6QNK2 874 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 SLC25A41Q8N5S1 370 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
COL4A6-206ENST00000477085 DCAF4L2Q8NA75 395 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 MFSD3Q96ES6 412 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ASIC4Q96FT7 647 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ASB16Q96NS5 453 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 PPP1R2P1Q96PQ5 205 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CYTH2Q99418 400 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 CINPQ9BW66 212 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-206ENST00000477085 ZNF576Q9H609 170 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 VPS45Q9NRW7 570 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 KIAA1522Q9P206 1035 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-206ENST00000477085 LHX3Q9UBR4 397 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 SLC24A2Q9UI40 661 aa14.64□□□□□ -0.07
COL4A6-206ENST00000477085 TRIM24O15164 1050 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 SMAD6O43541 496 aaKnown RBP14.63□□□□□ -0.07
COL4A6-206ENST00000477085 IVLP07476 585 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 TYRP14679 529 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 NMBRP28336 390 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 HPDP32754 393 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-206ENST00000477085 STX2P32856 288 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 CTSOP43234 321 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-206ENST00000477085 PLK1P53350 603 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 ADAM15Q13444 863 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 POU6F1Q14863 301 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 RASA2Q15283 850 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 SLC1A5Q15758 541 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 SMAD1Q15797 465 aaKnown RBP14.63□□□□□ -0.07
COL4A6-206ENST00000477085 KLHL38Q2WGJ6 581 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 PLEKHG6Q3KR16 790 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 ANKRD20A4Q4UJ75 823 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 TRIM68Q6AZZ1 485 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 MICALCLQ6ZW33 695 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 CYS1Q717R9 158 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 FAM76AQ8TAV0 307 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 MZB1Q8WU39 189 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 SLC44A1Q8WWI5 657 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 BBS2Q9BXC9 721 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 FSD1LQ9BXM9 530 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 IL22Q9GZX6 179 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 S1PR5Q9H228 398 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 ABCB8Q9NUT2 735 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 TBC1D14Q9P2M4 693 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 SLC17A6Q9P2U8 582 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 FCF1Q9Y324 198 aaKnown RBP14.63□□□□□ -0.07
COL4A6-206ENST00000477085 RPS6KL1Q9Y6S9 549 aa14.63□□□□□ -0.07
COL4A6-206ENST00000477085 ZNF821O75541 412 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-206ENST00000477085 CYBBP04839 570 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 NR1D1P20393 614 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 FCARP24071 287 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 ATP1A2P50993 1020 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 SCNN1BP51168 640 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 TMED2Q15363 201 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms