RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ADCY4Q8NFM4 1077 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 UBA3Q8TBC4 463 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PDCD6IPQ8WUM4 868 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 KBTBD7Q8WVZ9 684 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 NTAN1Q96AB6 310 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 ZBTB10Q96DT7 871 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 DTNBP1Q96EV8 351 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 HEXIM2Q96MH2 286 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 FCRL3Q96P31 734 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 NPY6RQ99463 290 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TRIM56Q9BRZ2 755 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 TCHPQ9BT92 498 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 SLC13A1Q9BZW2 595 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 KLHL4Q9C0H6 718 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 IQCGQ9H095 443 aaKnown RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 BRD8Q9H0E9 1235 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 FAM49AQ9H0Q0 323 aaPredicted RBP6.98□□□□□ -1.29
UBR4-212ENST00000475973 VCX3BQ9H321 246 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 TMPRSS4Q9NRS4 437 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PNPOQ9NVS9 261 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 GPATCH2LQ9NWQ4 482 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 OXSMQ9NWU1 459 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 HACD3Q9P035 362 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 RAB26Q9ULW5 256 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 PSAT1Q9Y617 370 aa6.98□□□□□ -1.29
UBR4-212ENST00000475973 WDR27A2RRH5 827 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 RGSL1A5PLK6 1076 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TRIM64BA6NI03 449 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 VILLO15195 856 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 GRID2O43424 1007 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TSPAN1O60635 241 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TADA2AO75478 443 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 LYPLA1O75608 230 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 AP2A1O95782 977 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 ADH1CP00326 375 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 RALBP11234 206 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 HARSP12081 509 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 COL6A2P12110 1019 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 INSRRP14616 1297 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 CPA3P15088 417 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 FSHRP23945 695 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 HOXA11P31270 313 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 ZNF135P52742 658 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 ALDH18A1P54886 795 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 RPL10AP62906 217 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 IRX4P78413 519 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 MRPS6P82932 125 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 KDSRQ06136 332 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 MGAT3Q09327 533 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 EIF4EBP2Q13542 120 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 KRT81Q14533 505 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TMEM132DQ14C87 1099 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 PCBP1Q15365 356 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBR4-212ENST00000475973 SOWAHAQ2M3V2 549 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TCTN1Q2MV58 587 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 GOLGA7BQ2TAP0 167 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 SLC25A52Q3SY17 297 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 RALGPS1Q5JS13 557 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 C1orf146Q5VVC0 180 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 AP1ARQ63HQ0 302 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 PDPK2PQ6A1A2 396 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 EFCAB12Q6NXP0 572 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 C16orf46Q6P387 395 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 FBXL19Q6PCT2 694 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 NAPRTQ6XQN6 538 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 ZCCHC23Q6ZST2 131 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 FAM43BQ6ZT52 329 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 DENND5BQ6ZUT9 1274 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TMC7Q7Z402 723 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 SETD3Q86TU7 594 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 C10orf107Q8IVU9 208 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 LSMEM2Q8N112 164 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 PQLC1Q8N2U9 271 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TMEM130Q8N3G9 435 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 FIBCD1Q8N539 461 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 C12orf29Q8N999 325 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TMEM102Q8N9M5 508 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 RP9Q8TA86 221 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 MAPK15Q8TD08 544 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 NAT14Q8WUY8 206 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 DNAJB3Q8WWF6 145 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 CDKL2Q92772 493 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 DLG3Q92796 817 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TOP1MTQ969P6 601 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 DGCR14Q96DF8 476 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 CERS2Q96G23 380 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 P2RY11Q96G91 374 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 GPR78Q96P69 363 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TSGA13Q96PP4 275 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 KCNK16Q96T55 309 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 MRPL45Q9BRJ2 306 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 FTHL17Q9BXU8 183 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 IL22Q9GZX6 179 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 DRC3Q9H069 523 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms