RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CD52P31358 61 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 SNAP47Q5SQN1 464 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 EXOC3L1Q86VI1 746 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 STK40Q8N2I9 435 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 MYLPFQ96A32 169 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 SNRNP25Q9BV90 132 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 MYH6P13533 1939 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ADRB2P07550 413 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 GRIA4P48058 902 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 DHRSXQ8N5I4 330 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 C2orf73Q8N5S3 287 aaPredicted RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 OR10G6Q8NH81 332 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 STAG3L4Q8TBR4 150 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ZNF558Q96NG5 402 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 FERD3LQ96RJ6 166 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 SEMA3CQ99985 751 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ZYG11BQ9C0D3 744 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 NRDE2Q9H7Z3 1164 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 SNPHO15079 494 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 VPS4BO75351 444 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ANXA6P08133 673 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 GSTM5P46439 218 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 CDC73Q6P1J9 531 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 CREG2Q8IUH2 290 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ZCCHC7Q8N3Z6 543 aaKnown RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 ATP13A3Q9H7F0 1226 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 SNX6Q9UNH7 406 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 A0A0A0MRY4 1105 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 C4BPBP20851 252 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 NTSP30990 170 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 COPZ1P61923 177 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 CDK16Q00536 496 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 FAM187BQ17R55 369 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 PCID2Q5JVF3 399 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 SAMD4BQ5PRF9 694 aaKnown RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 RBM43Q6ZSC3 357 aaKnown RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 SPATA13Q96N96 652 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 KIFC1Q9BW19 673 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 RPL14P50914 215 aaKnown RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 CTBP1Q13363 440 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 CNGA2Q16280 664 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 BPIFB6Q8NFQ5 453 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 EPS8L1Q8TE68 723 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ELL3Q9HB65 397 aaPredicted RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 SF3B1O75533 1304 aaKnown RBP eCLIP11.07□□□□□ -0.648e-6■■■■■ 107
VAPB-204ENST00000475243 E7ENQ6 273 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 TRAF3Q13114 568 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 NDUFAF6Q330K2 333 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 XKR6Q5GH73 641 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 KRT73Q86Y46 540 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ENKURQ8TC29 256 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 CXorf40BQ96DE9 158 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ACO2Q99798 780 aaKnown RBP11.07□□□□□ -0.64
VAPB-204ENST00000475243 FUCA2Q9BTY2 467 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 C9orf16Q9BUW7 83 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 MYRFQ9Y2G1 1151 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 PREX1Q8TCU6 1659 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 SGTAO43765 313 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 KRT33AO76009 404 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 FGRP09769 529 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 CERS2Q96G23 380 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 PWWP2AQ96N64 755 aa11.07□□□□□ -0.64
VAPB-204ENST00000475243 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 A0A088AWK7 358 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 GSAPA4D1B5 854 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TP73O15350 636 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 MFN2O95140 757 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 MED26O95402 600 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 LTA4HP09960 611 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 ZNF10P21506 573 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 MAPKAPK2P49137 400 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 CDK7P50613 346 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 KLHL23Q8NBE8 558 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PSME2Q9UL46 239 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 FGF10O15520 208 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 AVILO75366 819 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 CATP04040 527 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 LINC00032P0C843 101 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 SRP54P61011 504 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 RPL7AP62424 266 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 SKP1P63208 163 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 UBAP2LQ14157 1087 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 TARBP2Q15633 366 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 KIAA0408Q6ZU52 694 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 RIOX2Q8IUF8 465 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PTGR2Q8N8N7 351 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms