RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PDIA2Q13087 525 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 MPP3Q13368 585 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 PRPSAP1Q14558 356 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 DMC1Q14565 340 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 STAT4Q14765 748 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 CYTH1Q15438 398 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 DNAJC21Q5F1R6 531 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FAM182AQ5T1J6 154 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FAXCQ5TGI0 409 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 NAPEPLDQ6IQ20 393 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 OTOP3Q7RTS5 596 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 LINC00523Q86TU6 105 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TMEM135Q86UB9 458 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TMEM25Q86YD3 366 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FBXO36Q8NEA4 188 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 OR7D4Q8NG98 312 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SNIP1Q8TAD8 396 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 WFDC5Q8TCV5 224 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 NSMCE1Q8WV22 266 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 UBLCP1Q8WVY7 318 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FGF13Q92913 245 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SMARCD2Q92925 531 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 IRF7Q92985 503 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 E2F7Q96AV8 911 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 VOPP1Q96AW1 172 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 RSPRY1Q96DX4 576 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 PGM2Q96G03 612 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 MSLNLQ96KJ4 702 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 EBNA1BP2Q99848 306 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 NAT9Q9BTE0 207 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 DHRS4Q9BTZ2 278 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 CEP41Q9BYV8 373 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SP110Q9HB58 689 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TMBIM4Q9HC24 238 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SAYSD1Q9NPB0 183 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SPHK2Q9NRA0 654 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 GOLGA6AQ9NYA3 693 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 MOCS1Q9NZB8 636 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SEPT10Q9P0V9 454 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 INTS6Q9UL03 887 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 MTCH2Q9Y6C9 303 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SPTBN5Q9NRC6 3674 aaKnown RBP6.71□□□□□ -1.33
ATG4A-207ENST00000474825 NUP205Q92621 2012 aa6.71□□□□□ -1.33
ATG4A-207ENST00000474825 A0A087WUV0 522 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 GOLGA8KD6RF30 607 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 H0Y626 953 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 H3BQF6 201 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 GOLGA8MH3BSY2 632 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 MUSKO15146 869 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 LINC01565O15544 149 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 AVILO75366 819 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CSPG5O95196 566 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CYBBP04839 570 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 GCAP28676 217 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 LTBRP36941 435 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CSKP41240 450 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ELK3P41970 407 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 GEMIN4P57678 1058 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 FCHO2Q0JRZ9 810 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 LMAN2Q12907 356 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 GPS2Q13227 327 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CCDC85BQ15834 202 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 EML3Q32P44 896 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 PUS10Q3MIT2 529 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 FAM78AQ5JUQ0 283 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 RARS2Q5T160 578 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 AGBL2Q5U5Z8 902 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 RNF219Q5W0B1 726 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 IL31Q6EBC2 164 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 C3orf62Q6ZUJ4 267 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 METTL3Q86U44 580 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CCDC25Q86WR0 208 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 MFN1Q8IWA4 741 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ETFBKMTQ8IXQ9 262 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ZBED8Q8IZ13 594 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 CNPY4Q8N129 248 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 RIBC1Q8N443 379 aaPredicted RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ATP11CQ8NB49 1132 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 SPATA22Q8NHS9 363 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 DDI1Q8WTU0 396 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 PYROXD1Q8WU10 500 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 OSCP1Q8WVF1 389 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 TTC17Q96AE7 1141 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ISG20Q96AZ6 181 aaKnown RBP6.71□□□□□ -1.34
ATG4A-207ENST00000474825 ARL8AQ96BM9 186 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 TLCD1Q96CP7 247 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 MRGPRX2Q96LB1 330 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 C9orf72Q96LT7 481 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 NUDCD1Q96RS6 583 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 TRIB3Q96RU7 358 aa6.71□□□□□ -1.34
ATG4A-207ENST00000474825 RANBP9Q96S59 729 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms