RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 TEKT4Q8WW24 435 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 HSPH1Q92598 858 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 ARRDC3Q96B67 414 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 CELF6Q96J87 481 aaKnown RBP15.33■□□□□ 0.04
CALD1-215ENST00000472096 GTPBP2Q9BX10 602 aaKnown RBP15.33■□□□□ 0.04
CALD1-215ENST00000472096 ZWILCHQ9H900 591 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 NHEJ1Q9H9Q4 299 aaPredicted RBP15.33■□□□□ 0.04
CALD1-215ENST00000472096 OSGEPQ9NPF4 335 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.04
CALD1-215ENST00000472096 SPTLC3Q9NUV7 552 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 CWC15Q9P013 229 aaKnown RBP15.33■□□□□ 0.04
CALD1-215ENST00000472096 CTTNBP2NLQ9P2B4 639 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 LRRK1Q38SD2 2015 aa15.33■□□□□ 0.04
CALD1-215ENST00000472096 A0A1W2PPC4 97 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 H3BRJ5 948 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 DAPK3O43293 454 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 RARAP10276 462 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 HCAR3P49019 387 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 ATXN3P54252 364 aaPredicted RBP15.32■□□□□ 0.04
CALD1-215ENST00000472096 AFMIDQ63HM1 303 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 GAS2L3Q86XJ1 694 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 MINDY1Q8N5J2 469 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 NPWQ8N729 165 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 TC2NQ8N9U0 490 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 OR2AP1Q8NGE2 309 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 OR2I1PQ8NGU4 316 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 CASKIN2Q8WXE0 1202 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 PPP1R16AQ96I34 528 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 CCDC42Q96M95 316 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 HEPHQ9BQS7 1158 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 SLC39A8Q9C0K1 460 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 ZDHHC6Q9H6R6 413 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 PDFQ9HBH1 243 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 TM9SF3Q9HD45 589 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 DYRK4Q9NR20 520 aa15.32■□□□□ 0.04
CALD1-215ENST00000472096 HECAQ9UBI9 543 aaPredicted RBP15.32■□□□□ 0.04
CALD1-215ENST00000472096 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
CALD1-215ENST00000472096 ARHGAP42A6NI28 874 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 LATO43561 262 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 PROSCO94903 275 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ITGB7P26010 798 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ARL4AP40617 200 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 GCGRP47871 477 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 GRIA4P48058 902 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ZNF75DP51815 510 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
CALD1-215ENST00000472096 TAS2R38P59533 333 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
CALD1-215ENST00000472096 BNC1Q01954 994 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 UAP1L1Q3KQV9 507 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 INO80DQ53TQ3 878 aaPredicted RBP15.31■□□□□ 0.04
CALD1-215ENST00000472096 POLNQ7Z5Q5 900 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 TRIM69Q86WT6 500 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 CPNE8Q86YQ8 564 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ARHGAP12Q8IWW6 846 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ANKK1Q8NFD2 765 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 GDAP1L1Q96MZ0 367 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 ZDHHC5Q9C0B5 715 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 PREBQ9HCU5 417 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 PCNX2A6NKB5 2137 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 CABIN1Q9Y6J0 2220 aa15.31■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3DA0A087WVF3 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3IA0A087WXS9 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3KA0A087X1G2 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3FA6NER0 549 aaPredicted RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3LB9A6J9 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 PRAMEF11O60813 436 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3HP0C7X1 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 CSNK1EP49674 416 aaKnown RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 PAPOLAP51003 745 aaKnown RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 NEK3P51956 506 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 RHOAP61586 193 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TEAD4Q15561 434 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 PPM1JQ5JR12 505 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 ATXN7L2Q5T6C5 722 aaPredicted RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3GQ6DHY5 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3CQ6IPX1 549 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 LAYNQ6UX15 382 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 ERN2Q76MJ5 926 aaKnown RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 TBC1D3Q8IZP1 549 aaPredicted RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 RYBPQ8N488 228 aaPredicted RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 NETO2Q8NC67 525 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 TSC1Q92574 1164 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 WNT2BQ93097 391 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 VOPP1Q96AW1 172 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 SLC6A18Q96N87 628 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 CSPG4P5Q96PW8 444 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 DNAAF2Q9NVR5 837 aaKnown RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 LHX3Q9UBR4 397 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 UBA2Q9UBT2 640 aaPredicted RBP15.3■□□□□ 0.04
CALD1-215ENST00000472096 LCMT1Q9UIC8 334 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 MFHAS1Q9Y4C4 1052 aa15.3■□□□□ 0.04
CALD1-215ENST00000472096 A0A1B0GVT2 93 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms