RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KRTAP24-1Q3LI83 254 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 DSTYKQ6XUX3 929 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 NEK10Q6ZWH5 1172 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 ATOH1Q92858 354 aaPredicted RBP4.9□□□□□ -1.63
CD46-213ENST00000471987 PKP4Q99569 1192 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 DDX23Q9BUQ8 820 aaKnown RBP4.9□□□□□ -1.63
CD46-213ENST00000471987 GAREM1Q9H706 876 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 DYTNA2CJ06 578 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 C17orf100A8MU93 164 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 CHL1O00533 1208 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 SOCS5O75159 536 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 UMODP07911 640 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 TCEA1P23193 301 aaKnown RBP4.89□□□□□ -1.63
CD46-213ENST00000471987 DCTDP32321 178 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 GJC1P36383 396 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 MCM2P49736 904 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 MVDP53602 400 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 MYBPHQ13203 477 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 BYSLQ13895 437 aaKnown RBP4.89□□□□□ -1.63
CD46-213ENST00000471987 DCAF6Q58WW2 860 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 TANGO2Q6ICL3 276 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 RASGRP2Q7LDG7 609 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 STT3BQ8TCJ2 826 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 GPT2Q8TD30 523 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 NCSTNQ92542 709 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 MSTO1Q9BUK6 570 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 PLEKHA2Q9HB19 425 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 NFS1Q9Y697 457 aa4.89□□□□□ -1.63
CD46-213ENST00000471987 MORC2Q9Y6X9 1032 aaPredicted RBP4.89□□□□□ -1.63
CD46-213ENST00000471987 FAM157AC9JC47 383 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 E7EVH7 732 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 H0Y3Z8 333 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 BMPR1BO00238 502 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 IL1AP01583 271 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 RPL3P39023 403 aaKnown RBP4.88□□□□□ -1.63
CD46-213ENST00000471987 MTNR1AP48039 350 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 ILF3Q12906 894 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD46-213ENST00000471987 SMAD1Q15797 465 aaKnown RBP4.88□□□□□ -1.63
CD46-213ENST00000471987 TOGARAM2Q6ZUX3 1019 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 SYT13Q7L8C5 426 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 EXOC3L1Q86VI1 746 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 OR4N2Q8NGD1 307 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 OR6Y1Q8NGX8 325 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 BICD1Q96G01 975 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 IL17FQ96PD4 163 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 MVB12BQ9H7P6 319 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
CD46-213ENST00000471987 TMEM51Q9NW97 253 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 DONSONQ9NYP3 566 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 MALT1Q9UDY8 824 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
CD46-213ENST00000471987 SAA2-SAA4A0A096LPE2 208 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 MAGEA13PA6NCF6 341 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 HMX3A6NHT5 357 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 HBP1O60381 514 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 CH25HO95992 272 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 RBM5P52756 815 aaKnown RBP eCLIP4.87□□□□□ -1.63
CD46-213ENST00000471987 ARHGAP8P85298 464 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 ACSM2AQ08AH3 577 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 FAM27E3Q08E93 113 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 IL13RA2Q14627 380 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 AP5B1Q2VPB7 878 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 XKR9Q5GH70 373 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 KLHL24Q6TFL4 600 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 ZNF114Q8NC26 417 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 NODALQ96S42 347 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 TAF1DQ9H5J8 278 aaPredicted RBP4.87□□□□□ -1.63
CD46-213ENST00000471987 WDR6Q9NNW5 1121 aaKnown RBP4.87□□□□□ -1.63
CD46-213ENST00000471987 G6PC2Q9NQR9 355 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 ATP8A2Q9NTI2 1148 aa4.87□□□□□ -1.63
CD46-213ENST00000471987 PLIN1O60240 522 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 CSF1P09603 554 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 TNNT1P13805 278 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 MYF6P23409 242 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 FMO4P31512 558 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 CYP4A11Q02928 519 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 FOXO1Q12778 655 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 DLG1Q12959 904 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 RPE65Q16518 533 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 RHBDF2Q6PJF5 856 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 NAGSQ8N159 534 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 POC1AQ8NBT0 407 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 MCPH1Q8NEM0 835 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 RASSF8Q8NHQ8 419 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 RFWD2Q8NHY2 731 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 KTI12Q96EK9 354 aaPredicted RBP4.86□□□□□ -1.63
CD46-213ENST00000471987 CRB3Q9BUF7 120 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 HERC2P3Q9BVR0 1158 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 NLKQ9UBE8 527 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 CLDN16Q9Y5I7 305 aa4.86□□□□□ -1.63
CD46-213ENST00000471987 ABHD14A-ACY1A0A1B0GW23 586 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 TIMM23O14925 209 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 CLGNO14967 610 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 KRT38O76015 456 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 VNN2O95498 520 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 CSTBP04080 98 aaKnown RBP4.85□□□□□ -1.63
CD46-213ENST00000471987 SP1P08047 785 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms