RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 HDAC8Q9BY41 377 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 CPEB1Q9BZB8 566 aaKnown RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 ZDHHC6Q9H6R6 413 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 SEMA4GQ9NTN9 838 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 SEPT3Q9UH03 358 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 PILRBQ9UKJ0 227 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 MACROD2A1Z1Q3 448 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 CCDC66A2RUB6 948 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 GRID2IPA4D2P6 1211 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 KRIT1O00522 736 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 APOL1O14791 398 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 KRT86O43790 486 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 PEX11BO96011 259 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ITPKAP23677 461 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ITGB7P26010 798 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 CTNNA1P35221 906 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 HSPA9P38646 679 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 GARSP41250 739 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 CDKN2BP42772 138 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 METAP1P53582 386 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ADPRHP54922 357 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 CCZ1BP86790 482 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 CCZ1P86791 482 aaPredicted RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 TFDP2Q14188 446 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 LBRQ14739 615 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 AGBL4Q5VU57 503 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 DCAF12L1Q5VU92 463 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 TIGD7Q6NT04 549 aaPredicted RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 MFSD7Q6UXD7 560 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ERN2Q76MJ5 926 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 RABEPKQ7Z6M1 372 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 BBS5Q8N3I7 341 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 OR14C36Q8NHC7 312 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 EXD1Q8NHP7 514 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 UBE2Q2Q8WVN8 375 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 FATE1Q969F0 183 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 ARRDC3Q96B67 414 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 RBM41Q96IZ5 413 aaKnown RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 TSGA13Q96PP4 275 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 PSKH2Q96QS6 385 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 CINPQ9BW66 212 aaPredicted RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 C6orf106Q9H6K1 298 aaPredicted RBP15.51■□□□□ 0.07
SDC3-203ENST00000471567 PCDHA3Q9Y5H8 950 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 MYO15AQ9UKN7 3530 aa15.51■□□□□ 0.07
SDC3-203ENST00000471567 MEI4A8MW99 385 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 C10orf142B7Z368 130 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 PLRG1O43660 514 aaKnown RBP15.5■□□□□ 0.07
SDC3-203ENST00000471567 CCDC175P0C221 793 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 CCNCP24863 283 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 CTNNA2P26232 953 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 CCR5P51681 352 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 COPS2P61201 443 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 GBE1Q04446 702 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 SLC10A7Q0GE19 358 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 POM121L1PQ3SYA9 428 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 ZNF805Q5CZA5 627 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 TFDP3Q5H9I0 405 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 PIP5KL1Q5T9C9 394 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 KIAA0895LQ68EN5 471 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 NCEH1Q6PIU2 408 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 GDPD4Q6W3E5 623 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 SPOCD1Q6ZMY3 1216 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 RFX6Q8HWS3 928 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 RGL4Q8IZJ4 473 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 PLD5Q8N7P1 536 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 TSEN2Q8NCE0 465 aaKnown RBP15.5■□□□□ 0.07
SDC3-203ENST00000471567 OR6K2Q8NGY2 324 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 CEP76Q8TAP6 659 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 HCAR2Q8TDS4 363 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 KRT35Q92764 455 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 VOPP1Q96AW1 172 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 ZNF830Q96NB3 372 aaPredicted RBP15.5■□□□□ 0.07
SDC3-203ENST00000471567 TUBGCP5Q96RT8 1024 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 PARD6AQ9NPB6 346 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 DTLQ9NZJ0 730 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 SUSD2Q9UGT4 822 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 EVLQ9UI08 416 aaPredicted RBP15.5■□□□□ 0.07
SDC3-203ENST00000471567 AMFRQ9UKV5 643 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.5■□□□□ 0.07
SDC3-203ENST00000471567 CEP192Q8TEP8 1941 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 NUMA1Q14980 2115 aa15.5■□□□□ 0.07
SDC3-203ENST00000471567 GON4LQ3T8J9 2241 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 GVINP1Q7Z2Y8 2422 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 DMDP11532 3685 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 A0A0U1RQJ8 604 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 RNF103O00237 685 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 PLK4O00444 970 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 MATN3O15232 486 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 GNSP15586 552 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 GKP32189 559 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 MAPK8P45983 427 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 NEK3P51956 506 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 SLC10A2Q12908 348 aaPredicted RBP15.49■□□□□ 0.07
SDC3-203ENST00000471567 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
SDC3-203ENST00000471567 ZNF235Q14590 738 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 PPP2R5EQ16537 467 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms