RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 A0A1W2PQU0 124 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 TEX33O43247 280 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 KDELR3O43731 214 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 AP1G1O43747 822 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 SLU7O95391 586 aaKnown RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 CD160O95971 181 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 GZMAP12544 262 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 EPHB2P29323 1055 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 MAT2AP31153 395 aaKnown RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 ACVRL1P37023 503 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 YBEYP58557 167 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 SNRPD1P62314 119 aaKnown RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 CCNI2Q6ZMN8 369 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 TMPRSS7Q7RTY8 843 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 PNPLA1Q8N8W4 532 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 TMEM145Q8NBT3 493 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 GRIN3AQ8TCU5 1115 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
HMGN1-211ENST00000471260 EPAS1Q99814 870 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 CATSPERBQ9H7T0 1116 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 PARVAQ9NVD7 372 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 FTSJ1Q9UET6 329 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 ZMIZ1Q9ULJ6 1067 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 FZD10Q9ULW2 581 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 ASPMQ8IZT6 3477 aa13.74□□□□□ -0.21
HMGN1-211ENST00000471260 KMT2BQ9UMN6 2715 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 A0A1B0GTH6 734 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 KRT37O76014 449 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 PCDH8O95206 1070 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 POP4O95707 220 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 GSRP00390 522 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 C1SP09871 688 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 ADRB3P13945 408 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 HNRNPA2B1P22626 353 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 EPHA8P29322 1005 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 AKT2P31751 481 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 PRKCIP41743 596 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 DNA2P51530 1060 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 RPL7AP62424 266 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 RPS21P63220 83 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 SHBQ15464 509 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 INO80DQ53TQ3 878 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 E4F1Q66K89 784 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 KIAA1161Q6NSJ0 714 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 SCYL2Q6P3W7 929 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 FBXL19Q6PCT2 694 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 SPATS2Q86XZ4 545 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 RTL3Q8N8U3 475 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 OR2AP1Q8NGE2 309 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 KLHDC7BQ96G42 594 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 OSBPL1AQ9BXW6 950 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 HECAQ9UBI9 543 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 FCF1Q9Y324 198 aaKnown RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 HS3ST3A1Q9Y663 406 aa13.73□□□□□ -0.21
HMGN1-211ENST00000471260 COL5A1P20908 1838 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-211ENST00000471260 SLC31A1O15431 190 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 FGF10O15520 208 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-211ENST00000471260 TSPAN6O43657 245 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 LDOC1O95751 146 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-211ENST00000471260 IL9RQ01113 521 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 RAD51Q06609 339 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 TBX2Q13207 712 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-211ENST00000471260 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 ASIC2Q16515 512 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 PARP15Q460N3 678 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 ZNF805Q5CZA5 627 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 FIGNQ5HY92 759 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 PRAMEF14Q5SWL7 426 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 GATAD2AQ86YP4 633 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 UMODL1-AS1Q8N2C9 162 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
HMGN1-211ENST00000471260 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 MAGEB5Q9BZ81 275 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 ZFR2Q9UPR6 939 aaKnown RBP13.72□□□□□ -0.21
HMGN1-211ENST00000471260 FADS3Q9Y5Q0 445 aa13.72□□□□□ -0.21
HMGN1-211ENST00000471260 TP53BP1Q12888 1972 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ENC1O14682 589 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 BUB1O43683 1085 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 CREB3O43889 395 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 THEGLP0DJG4 465 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ZNF135P52742 658 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms