RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 RYBPQ8N488 228 aaPredicted RBP17.79■□□□□ 0.44
COL7A1-208ENST00000470076 DCBLD1Q8N8Z6 715 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 NTAN1Q96AB6 310 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 TBC1D31Q96DN5 1066 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 BMFQ96LC9 184 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 GPR27Q9NS67 375 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 ACTL7AQ9Y615 435 aa17.79■□□□□ 0.44
COL7A1-208ENST00000470076 FAM72CH0Y354 149 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 EPHB6O15197 1021 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FFAR2O15552 330 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 RAMP2O60895 175 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 GSRP00390 522 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 PLEKP08567 350 aaPredicted RBP17.78■□□□□ 0.44
COL7A1-208ENST00000470076 GIMD1P0DJR0 217 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 CKMT1AP12532 417 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 ABCG1P45844 678 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 RABIFP47224 123 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 HDAC4P56524 1084 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 SNRPD1P62314 119 aaKnown RBP17.78■□□□□ 0.44
COL7A1-208ENST00000470076 SEMG2Q02383 582 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 SGCGQ13326 291 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FGL2Q14314 439 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 ZNF805Q5CZA5 627 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FAM72AQ5TYM5 149 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FAM72DQ6L9T8 149 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FAM72BQ86X60 149 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FAM172AQ8WUF8 416 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 ARHGEF26Q96DR7 871 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 DCBLD2Q96PD2 775 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
COL7A1-208ENST00000470076 C1QTNF2Q9BXJ5 285 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 LMBRD1Q9NUN5 540 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 FANCLQ9NW38 375 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 DNAJC28Q9NX36 388 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 NLGN3Q9NZ94 848 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 ADAM22Q9P0K1 906 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 NEU3Q9UQ49 428 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 SIK3Q9Y2K2 1263 aa17.78■□□□□ 0.44
COL7A1-208ENST00000470076 SPTY2D1-AS1A0A0U1RR47 76 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 POM121BA6NF01 834 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 ZSCAN5CA6NGD5 496 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 C16orf96A6NNT2 1141 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 FPGTO14772 594 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 SCAMP1O15126 338 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 GJB6O95452 261 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 POP4O95707 220 aaKnown RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 CALB1P05937 261 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 RFC1P35251 1148 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 SOWAHCQ53LP3 525 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 PHF13Q86YI8 300 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-208ENST00000470076 CCDC185Q8N715 623 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 C3orf20Q8ND61 904 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 ANKRD20A12PQ8NF67 263 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 NEK11Q8NG66 645 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 ASB12Q8WXK4 309 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 PCDHB18PQ96TA0 734 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 DUSP23Q9BVJ7 150 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 SELENOOQ9BVL4 669 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 USP29Q9HBJ7 922 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 EVA1BQ9NVM1 165 aa17.77■□□□□ 0.44
COL7A1-208ENST00000470076 SMG1Q96Q15 3661 aaKnown RBP17.77■□□□□ 0.43
COL7A1-208ENST00000470076 H3BM21 787 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 KRIT1O00522 736 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 NEMP1O14524 444 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 RAD51BO15315 384 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 KDELR3O43731 214 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 CSF2P04141 144 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 NME1P15531 152 aaKnown RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 GPD1P21695 349 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 GKP32189 559 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 EIF2S3P41091 472 aaKnown RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 ABL2P42684 1182 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 DUSP3P51452 185 aaPredicted RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 FZD2Q14332 565 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 ACAP1Q15027 740 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 SYCP1Q15431 976 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 CLEC16AQ2KHT3 1053 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 MYLK3Q32MK0 819 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 ZNF542PQ5EBM4 170 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 WDR59Q6PJI9 974 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 LRRC69Q6ZNQ3 347 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 PARGQ86W56 976 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 FAM181AQ8N9Y4 354 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 DENND6BQ8NEG7 585 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 OR6K2Q8NGY2 324 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 CASKIN2Q8WXE0 1202 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 APOLD1Q96LR9 279 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 KLF6Q99612 283 aaPredicted RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 MAGEB5Q9BZ81 275 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
COL7A1-208ENST00000470076 PTPRQQ9UMZ3 2332 aa17.76■□□□□ 0.43
COL7A1-208ENST00000470076 ANKRD62A6NC57 917 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms