RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NIPA2Q8N8Q9 360 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 TMIEQ8NEW7 156 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 OR2T34Q8NGX1 318 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 OMDQ99983 421 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A6-205ENST00000468338 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
COL4A6-205ENST00000468338 KLC2Q9H0B6 622 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 ETNK1Q9HBU6 452 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 TMEM9BQ9NQ34 198 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 IGSF5Q9NSI5 407 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
COL4A6-205ENST00000468338 TPX2Q9ULW0 747 aaKnown RBP11.37□□□□□ -0.59
COL4A6-205ENST00000468338 AP4E1Q9UPM8 1137 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 SLCO1B1Q9Y6L6 691 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 UPK3BL1B0FP48 263 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 UPK3BL2E5RIL1 263 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 RNF103O00237 685 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 FGF10O15520 208 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 LATO43561 262 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 NDUFB5O43674 189 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CREB3O43889 395 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 MFAP3LO75121 409 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 RNASEH2AO75792 299 aaKnown RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CFIP05156 583 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 IL1R2P27930 398 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CHRNA3P32297 505 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CCR5P51681 352 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 ZNF135P52742 658 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 GEMIN4P57678 1058 aaKnown RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 GFPT1Q06210 699 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 TBX2Q13207 712 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 PIGHQ14442 188 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 POLD3Q15054 466 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-205ENST00000468338 SLC18A3Q16572 532 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 PARP15Q460N3 678 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CCDC122Q5T0U0 273 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 AGBL4Q5VU57 503 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 AFMIDQ63HM1 303 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 IL31Q6EBC2 164 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 NCEH1Q6PIU2 408 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 DPY19L3Q6ZPD9 716 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CHST14Q8NCH0 376 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 ARHGEF26Q96DR7 871 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 CCDC114Q96M63 670 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 ZDHHC5Q9C0B5 715 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 LRRC19Q9H756 370 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 EBF2Q9HAK2 575 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 ABHD10Q9NUJ1 306 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 GPATCH2LQ9NWQ4 482 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 DONSONQ9NYP3 566 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 MYO1AQ9UBC5 1043 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 ACTL7AQ9Y615 435 aa11.36□□□□□ -0.59
COL4A6-205ENST00000468338 TRPM6Q9BX84 2022 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 A0A1W2PPC4 97 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 LRRC72A6NJI9 287 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 RASA4BC9J798 803 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 RASA4O43374 803 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PLRG1O43660 514 aaKnown RBP11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PRPSAP2O60256 369 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PRNPP04156 253 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 SYPP08247 313 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 TCF4P15884 667 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 NDST2P52849 883 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 EPHA4P54764 986 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 TAS2R38P59533 333 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 TPI1P60174 286 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 BNC1Q01954 994 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 SERINC3Q13530 473 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 DPYSL2Q16555 572 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 INO80DQ53TQ3 878 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-205ENST00000468338 CARD16Q5EG05 197 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PIP5KL1Q5T9C9 394 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 DAB2IPQ5VWQ8 1189 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 ALKBH2Q6NS38 261 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 ZCCHC9Q8N567 271 aaKnown RBP11.35□□□□□ -0.59
COL4A6-205ENST00000468338 GANCQ8TET4 914 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 CASKIN2Q8WXE0 1202 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
COL4A6-205ENST00000468338 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 IP6K2Q9UHH9 426 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
COL4A6-205ENST00000468338 PLXNA2O75051 1894 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 A6NJY4 79 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 FSBPO95073 299 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 GSRP00390 522 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 CSRP1P21291 193 aaKnown RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 VAMP1P23763 118 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms