RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HYAL1Q12794 435 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CBX2Q14781 532 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CYTH1Q15438 398 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ASTLQ6HA08 431 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 RANBP10Q6VN20 620 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 UNC5BQ8IZJ1 945 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FBF1Q8TES7 1133 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 PYROXD1Q8WU10 500 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 XPO6Q96QU8 1125 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ROPN1BQ9BZX4 212 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TLE6Q9H808 572 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ROPN1Q9HAT0 212 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 SYBUQ9NX95 663 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LGALS13Q9UHV8 139 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 KIAA1549LQ6ZVL6 1849 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 E2F8A0AVK6 867 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CXorf49A8MYA2 514 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 OPA1O60313 960 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ALDH1A2O94788 518 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LUC7L3O95232 432 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 BMP1P13497 986 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TSHRP16473 764 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CR2P20023 1033 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MGAT1P26572 445 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 DSC2Q02487 901 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LBRQ14739 615 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 RAB30Q15771 203 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 AGBL2Q5U5Z8 902 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FAAH2Q6GMR7 532 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 SDE2Q6IQ49 451 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TRMT10BQ6PF06 316 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MICALCLQ6ZW33 695 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 GABPB2Q8TAK5 448 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 DCAKDQ8WVC6 231 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ING5Q8WYH8 240 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LRRC39Q96DD0 335 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ERP27Q96DN0 273 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MRPL38Q96DV4 380 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FEM1AQ9BSK4 669 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LINC00597Q9H2U6 94 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ACBD3Q9H3P7 528 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ACSS3Q9H6R3 686 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 XAB2Q9HCS7 855 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TDP1Q9NUW8 608 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 INTS6Q9UL03 887 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 A0A087WUV0 522 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 E7EVH7 732 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 POLR3GO15318 223 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MYZAPP0CAP1 466 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 CREB1P16220 341 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PRKCHP24723 683 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 WEE1P30291 646 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 RENBPP51606 427 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MPP7Q5T2T1 576 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 RNF219Q5W0B1 726 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 NAIF1Q69YI7 327 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 SYCE2Q6PIF2 218 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 TMC5Q6UXY8 1006 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PPP1R21Q6ZMI0 780 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF783Q6ZMS7 281 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 TDRPQ86YL5 185 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 LEMD2Q8NC56 503 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 APOL2Q9BQE5 337 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MGME1Q9BQP7 344 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 SLC25A51Q9H1U9 297 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MUC22E2RYF6 1773 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ERI2A8K979 691 aaKnown RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 RASGRF2O14827 1237 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 SNAP91O60641 907 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 XYLBO75191 536 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF821O75541 412 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PENKP01210 267 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 CERCAMQ5T4B2 595 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MARC1Q5VT66 337 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 HHATQ5VTY9 493 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 CEP128Q6ZU80 1094 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 TMEM25Q86YD3 366 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 SAMD14Q8IZD0 417 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 TDHQ8IZJ6 230 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ATP11CQ8NB49 1132 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 HJURPQ8NCD3 748 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PABPC5Q96DU9 382 aaKnown RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 TMA16Q96EY4 203 aaKnown RBP8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF599Q96NL3 588 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PPCSQ9HAB8 311 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 NT5MQ9NPB1 228 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MRGBPQ9NV56 204 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 VPS18Q9P253 973 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 MSRAQ9UJ68 235 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF510Q9Y2H8 683 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 PRUNE2Q8WUY3 3088 aa8.38□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms