RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PHF13Q86YI8 300 aaPredicted RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 PLPP6Q8IY26 295 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 RYBPQ8N488 228 aaPredicted RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 NETO2Q8NC67 525 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 OR4C6Q8NH72 309 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 CRELD1Q96HD1 420 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 PCMTD1Q96MG8 357 aaPredicted RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 MAGEH1Q9H213 219 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 NOL6Q9H6R4 1146 aaKnown RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 SCUBE2Q9NQ36 999 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 GPR27Q9NS67 375 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 ITM2BQ9Y287 266 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 HS3ST3A1Q9Y663 406 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 BAHCC1Q9P281 2608 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 TCRBV5S1A1TA0A578 114 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 C16orf96A6NNT2 1141 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 A6NNZ2 444 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 LGALS16A8MUM7 142 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 AP1G1O43747 822 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 MYF5P13349 255 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 GPD1P21695 349 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 ETFBP38117 255 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 INSM1Q01101 510 aaPredicted RBP24.89■■□□□ 1.58
PTCH1-210ENST00000468211 COL9A2Q14055 689 aaPredicted RBP24.89■■□□□ 1.58
PTCH1-210ENST00000468211 MON1BQ7L1V2 547 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 APTXQ7Z2E3 356 aaKnown RBP24.89■■□□□ 1.58
PTCH1-210ENST00000468211 PTAR1Q7Z6K3 402 aaPredicted RBP24.89■■□□□ 1.58
PTCH1-210ENST00000468211 NEK11Q8NG66 645 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 NTAN1Q96AB6 310 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 LRIG1Q96JA1 1093 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 FEM1CQ96JP0 617 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 KLF6Q99612 283 aaPredicted RBP24.89■■□□□ 1.58
PTCH1-210ENST00000468211 SELENOOQ9BVL4 669 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 KLC2Q9H0B6 622 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 HSD3B7Q9H2F3 369 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 DAAM1Q9Y4D1 1078 aa24.89■■□□□ 1.58
PTCH1-210ENST00000468211 LRRK1Q38SD2 2015 aa24.89■■□□□ 1.57
PTCH1-210ENST00000468211 A0A087WV48 116 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 CXorf51AA0A1B0GTR3 108 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 IGLON5A6NGN9 336 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 RAMP2O60895 175 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 FZD2Q14332 565 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 TPRG1LQ5T0D9 272 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 ATXN7L2Q5T6C5 722 aaPredicted RBP24.88■■□□□ 1.57
PTCH1-210ENST00000468211 C3orf20Q8ND61 904 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 OR2AP1Q8NGE2 309 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 RFFLQ8WZ73 363 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 NXPE2Q96DL1 559 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 C1QTNF2Q9BXJ5 285 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 RETREG1Q9H6L5 497 aa24.88■■□□□ 1.57
PTCH1-210ENST00000468211 SIGLEC16A6NMB1 481 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 KRIT1O00522 736 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 CCP110O43303 1012 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 TLX3O43711 291 aaPredicted RBP24.87■■□□□ 1.57
PTCH1-210ENST00000468211 KDELR3O43731 214 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 RPL7AP62424 266 aaKnown RBP24.87■■□□□ 1.57
PTCH1-210ENST00000468211 MYL5Q02045 173 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 UBXN1Q04323 297 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 NCAPHQ15003 741 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 POLD3Q15054 466 aaPredicted RBP24.87■■□□□ 1.57
PTCH1-210ENST00000468211 ZNF805Q5CZA5 627 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 KYAT3Q6YP21 454 aaKnown RBP24.87■■□□□ 1.57
PTCH1-210ENST00000468211 TMC6Q7Z403 805 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 SLFN11Q7Z7L1 901 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 BAP1Q92560 729 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 DCBLD2Q96PD2 775 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 SEPT11Q9NVA2 429 aaKnown RBP24.87■■□□□ 1.57
PTCH1-210ENST00000468211 DNAJC28Q9NX36 388 aa24.87■■□□□ 1.57
PTCH1-210ENST00000468211 ASXL3Q9C0F0 2248 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 LY6G6EA0A0G2JKS1 128 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 NEBLO76041 1014 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 GSRP00390 522 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 CALB1P05937 261 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 UGT2B4P06133 528 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 DAB2P98082 770 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 SEMG2Q02383 582 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 RTP5Q14D33 572 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 MYLK3Q32MK0 819 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 SOWAHCQ53LP3 525 aaPredicted RBP24.86■■□□□ 1.57
PTCH1-210ENST00000468211 LRRC73Q5JTD7 316 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 IFT43Q96FT9 208 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 KLHL32Q96NJ5 620 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 ERGIC2Q96RQ1 377 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 AGPAT1Q99943 283 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 ANO10Q9NW15 660 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 KLF15Q9UIH9 416 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 HPCAL4Q9UM19 191 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 AK5Q9Y6K8 562 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 U3KQA8 63 aa24.86■■□□□ 1.57
PTCH1-210ENST00000468211 LRRC10BA6NIK2 292 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 BUB1O43683 1085 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 TMCC1O94876 653 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 GEMIN4P57678 1058 aaKnown RBP24.85■■□□□ 1.57
PTCH1-210ENST00000468211 SNRPD1P62314 119 aaKnown RBP24.85■■□□□ 1.57
PTCH1-210ENST00000468211 SCYL2Q6P3W7 929 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 SASS6Q6UVJ0 657 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 RTL3Q8N8U3 475 aaKnown RBP24.85■■□□□ 1.57
PTCH1-210ENST00000468211 DCBLD1Q8N8Z6 715 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 FAM174AQ8TBP5 190 aa24.85■■□□□ 1.57
PTCH1-210ENST00000468211 NRSN2Q9GZP1 204 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms