RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 IGHV1OR15-9A0A0B4J2B8 117 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 HACD1B0YJ81 288 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 MID1O15344 667 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 SLC7A4O43246 635 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 RHOBTB1O94844 696 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 CCNB1P14635 433 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 CD6P30203 668 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 MMP13P45452 471 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 PSMD8P48556 350 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 SIM2Q14190 667 aaPredicted RBP17.19■□□□□ 0.34
USP39-211ENST00000465282 ARSIQ5FYB1 569 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 CEP68Q76N32 757 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
USP39-211ENST00000465282 CHST14Q8NCH0 376 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 FAM131CQ96AQ9 280 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 FAM122AQ96E09 287 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 TUBGCP5Q96RT8 1024 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 OMDQ99983 421 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 KDM4CQ9H3R0 1056 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 DYRK4Q9NR20 520 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 TRMT1Q9NXH9 659 aaKnown RBP17.19■□□□□ 0.34
USP39-211ENST00000465282 RAB23Q9ULC3 237 aa17.19■□□□□ 0.34
USP39-211ENST00000465282 ABCA7Q8IZY2 2146 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 KRIT1O00522 736 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 MAP3K13O43283 966 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 LEFTY1O75610 366 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 MAP3K6O95382 1288 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 CTSLP07711 333 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 AP1S1P61966 158 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
USP39-211ENST00000465282 NHLH1Q02575 133 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 ADCY2Q08462 1091 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 ELF2Q15723 593 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 SEL1L2Q5TEA6 688 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 DCAF12L1Q5VU92 463 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 NPNTQ6UXI9 565 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 SRLQ86TD4 932 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 HDDC3Q8N4P3 179 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 CADM4Q8NFZ8 388 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
USP39-211ENST00000465282 RLN3Q8WXF3 142 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 LOXL4Q96JB6 756 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 ZNF641Q96N77 438 aaPredicted RBP17.18■□□□□ 0.34
USP39-211ENST00000465282 LGMNQ99538 433 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 FERMT1Q9BQL6 677 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 MGME1Q9BQP7 344 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 TLR10Q9BXR5 811 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 HDAC8Q9BY41 377 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 BTBD1Q9H0C5 482 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 ZDHHC6Q9H6R6 413 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 WSB2Q9NYS7 404 aaPredicted RBP17.18■□□□□ 0.34
USP39-211ENST00000465282 SARDHQ9UL12 918 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 TPX2Q9ULW0 747 aaKnown RBP17.18■□□□□ 0.34
USP39-211ENST00000465282 PYCARDQ9ULZ3 195 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 CYP8B1Q9UNU6 501 aa17.18■□□□□ 0.34
USP39-211ENST00000465282 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.18■□□□□ 0.342e-8■■■□□ 16.1
USP39-211ENST00000465282 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 KPNA3O00505 521 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 KCNK3O14649 394 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 NDUFS2O75306 463 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 NEBLO76041 1014 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 PECAM1P16284 738 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 ITGB7P26010 798 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 AP1B1Q10567 949 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 ZNF211Q13398 564 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 PRKD1Q15139 912 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 LLGL1Q15334 1064 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 ZNF805Q5CZA5 627 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 ZNF569Q5MCW4 686 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 ATXN7L2Q5T6C5 722 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 ALG1LQ6GMV1 187 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 GDPD4Q6W3E5 623 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 LPCAT2Q7L5N7 544 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 CACUL1Q86Y37 369 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 AADATQ8N5Z0 425 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 GRIN3AQ8TCU5 1115 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 GANCQ8TET4 914 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 RAB7BQ96AH8 199 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 HAUS1Q96CS2 278 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 TOE1Q96GM8 510 aaKnown RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 NUDCD1Q96RS6 583 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 IL12RB2Q99665 862 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 POLR1EQ9GZS1 481 aaKnown RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 DUSP15Q9H1R2 295 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 ATP13A3Q9H7F0 1226 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 RBM22Q9NW64 420 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP39-211ENST00000465282 SAE1Q9UBE0 346 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 DKK3Q9UBP4 350 aa17.17■□□□□ 0.34
USP39-211ENST00000465282 EVLQ9UI08 416 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 MBD1Q9UIS9 605 aaPredicted RBP17.17■□□□□ 0.34
USP39-211ENST00000465282 A0A1W2PP55 124 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 A0A1W2PQ67 120 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 RNASEH2AO75792 299 aaKnown RBP17.16■□□□□ 0.34
USP39-211ENST00000465282 CR2P20023 1033 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 SERPINA4P29622 427 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 DRD3P35462 400 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 SUOXP51687 545 aa17.16■□□□□ 0.34
USP39-211ENST00000465282 SRSF5Q13243 272 aaKnown RBP17.16■□□□□ 0.34
USP39-211ENST00000465282 KLF1Q13351 362 aaPredicted RBP17.16■□□□□ 0.34
USP39-211ENST00000465282 NOMO1Q15155 1222 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms