RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 DCAF12L1Q5VU92 463 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 RNF219Q5W0B1 726 aaPredicted RBP17.79■□□□□ 0.44
CPSF4-209ENST00000465132 RETSATQ6NUM9 610 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 SERPINA13PQ6UXR4 307 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 ZNF354CQ86Y25 554 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 TTC13Q8NBP0 860 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 KRT35Q92764 455 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 BRD8Q9H0E9 1235 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 MIR1-1HGQ9H1L0 117 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 ABCB8Q9NUT2 735 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 PCDHB9Q9Y5E1 797 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 AKAP13Q12802 2813 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 USP27XA6NNY8 438 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 CES2O00748 559 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 KCNK3O14649 394 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 TCP1P17987 556 aaKnown RBP17.78■□□□□ 0.44
CPSF4-209ENST00000465132 ST8SIA6P61647 398 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 TAZQ16635 292 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 MFSD7Q6UXD7 560 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 CPNE8Q86YQ8 564 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 SLC35F6Q8N357 371 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 NAPGQ99747 312 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-209ENST00000465132 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 OSBPL8Q9BZF1 889 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 SLC25A13Q9UJS0 675 aa17.78■□□□□ 0.44
CPSF4-209ENST00000465132 PACSIN2Q9UNF0 486 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-209ENST00000465132 C3orf70A6NLC5 250 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 BCAT2O15382 392 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 DDX3YO15523 660 aaKnown RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 SRPRAP08240 638 aaKnown RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 FTH1P19P0C7X4 201 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 ACADMP11310 421 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 PRLRP16471 622 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 AMPD1P23109 780 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 IL4RP24394 825 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 HLA-FP30511 346 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 CASQ1P31415 396 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 ETF1P62495 437 aaKnown RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 BNC1Q01954 994 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 PAFAH1B3Q15102 231 aaKnown RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 PITRM1Q5JRX3 1037 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 SLC9A4Q6AI14 798 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 KIAA0907Q7Z7F0 614 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 CIR1Q86X95 450 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 CACUL1Q86Y37 369 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 DCAF4L2Q8NA75 395 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 KDM1BQ8NB78 822 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 OR2T3Q8NH03 318 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 PCDH19Q8TAB3 1148 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 CASKIN2Q8WXE0 1202 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 ADAMTS14Q8WXS8 1223 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 ALG3Q92685 438 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 P3H4Q92791 437 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 HAUS1Q96CS2 278 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 TLR10Q9BXR5 811 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 FRMD8P1Q9BZ68 369 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-209ENST00000465132 IL21RQ9HBE5 538 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 ATP13A1Q9HD20 1204 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 NEU3Q9UQ49 428 aa17.77■□□□□ 0.44
CPSF4-209ENST00000465132 hCG_1818297A0A087WSY0 165 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 PPP1R12AO14974 1030 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-209ENST00000465132 ZZEF1O43149 2961 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CBFA2T3O75081 653 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CAPNS1P04632 268 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CD48P09326 243 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 ZNF883P0CG24 379 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 PYGMP11217 842 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 HLA-EP13747 358 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CSKP41240 450 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 DNA2P51530 1060 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CAMK2GQ13555 558 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-209ENST00000465132 PDK1Q15118 436 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 KAZNQ674X7 775 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 MBLAC2Q68D91 279 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 CXorf57Q6NSI4 855 aaKnown RBP17.76■□□□□ 0.43
CPSF4-209ENST00000465132 TIGD7Q6NT04 549 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-209ENST00000465132 BBS12Q6ZW61 710 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 GLRX5Q86SX6 157 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 FAM124AQ86V42 546 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 BBS5Q8N3I7 341 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 C1orf216Q8TAB5 229 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 TTC17Q96AE7 1141 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 MYEOVQ96EZ4 313 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 SPON2Q9BUD6 331 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 MAGEB5Q9BZ81 275 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 PCED1AQ9H1Q7 454 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 TMEM245Q9H330 911 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 GAREM1Q9H706 876 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 HOMER3Q9NSC5 361 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 ZNF212Q9UDV6 495 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 EIF2B4Q9UI10 523 aaKnown RBP17.76■□□□□ 0.43
CPSF4-209ENST00000465132 PCOLCE2Q9UKZ9 415 aa17.76■□□□□ 0.43
CPSF4-209ENST00000465132 RASA4BC9J798 803 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 APOC4-APOC2K7ER74 178 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 TAF4O00268 1085 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 MTSS1O43312 755 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms