RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RABGAP1Q9Y3P9 1069 aa4.42□□□□□ -1.7
ITGB1-208ENST00000464001 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 GRID2O43424 1007 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 FIBPO43427 364 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ITM2AO43736 263 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 SERPINI2O75830 405 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ACTL6BO94805 426 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 VDRP11473 427 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 GYS1P13807 737 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 THPOP40225 353 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 TUBA1BP68363 451 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
ITGB1-208ENST00000464001 GXYLT1Q4G148 440 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 SYTL3Q4VX76 610 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 EFHC1Q5JVL4 640 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ARMC3Q5W041 872 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 AADACL2Q6P093 401 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 RNF144BQ7Z419 303 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 FOXP4Q8IVH2 680 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-208ENST00000464001 SLC44A2Q8IWA5 706 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-208ENST00000464001 MIGA1Q8NAN2 632 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF527Q8NB42 609 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ARRDC3Q96B67 414 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 FIZ1Q96SL8 496 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 KATNAL1Q9BW62 490 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
ITGB1-208ENST00000464001 DDX31Q9H8H2 851 aaKnown RBP4.41□□□□□ -1.7
ITGB1-208ENST00000464001 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 OSGIN2Q9Y236 505 aa4.41□□□□□ -1.7
ITGB1-208ENST00000464001 A0A087WYN8 130 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 hCG_1642624A0A1W2PR95 340 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 A6NCN8 305 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 SRRM3A6NNA2 597 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 CYSRT1A8MQ03 144 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 LGALS16A8MUM7 142 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 DDNO94850 711 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 DAOP14920 347 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 ITGB8P26012 769 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 AP2B1P63010 937 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 TRAF3Q13114 568 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 ZNF718Q3SXZ3 478 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 ALDH1L2Q3SY69 923 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 ATG9BQ674R7 924 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 PGBD2Q6P3X8 592 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 GGT6Q6P531 493 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 CCDC117Q8IWD4 279 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 SCN4BQ8IWT1 228 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 TEX45Q8NA69 505 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 C2CD4CQ8TF44 421 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 TEFMQ96QE5 360 aaKnown RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 SLC25A33Q9BSK2 321 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
ITGB1-208ENST00000464001 DAPP1Q9UN19 280 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 SLC45A1Q9Y2W3 748 aa4.4□□□□□ -1.71
ITGB1-208ENST00000464001 IGHV4-28A0A0C4DH34 117 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 ERVV-2B6SEH9 535 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SYN3O14994 580 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 KRT36O76013 467 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 GAS8-AS1O95177 125 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 DDAH2O95865 285 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SERPINA4P29622 427 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SKIV2L2P42285 1042 aaKnown RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 RPS6KA3P51812 740 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 DCTN1Q14203 1278 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 GALNTL6Q49A17 601 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 FAM76BQ5HYJ3 339 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 NCAPH2Q6IBW4 605 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 KLHL17Q6TDP4 642 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 GALNT7Q86SF2 657 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 PTGR2Q8N8N7 351 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 C3orf49Q96BT1 292 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 IGSF21Q96ID5 467 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SERINC2Q96SA4 455 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 CENPOQ9BU64 300 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 CRB3Q9BUF7 120 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 SEPSECSQ9HD40 501 aaKnown RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 OCIAD1Q9NX40 245 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 KLQ9UEF7 1012 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 PGAP2Q9UHJ9 254 aa4.39□□□□□ -1.71
ITGB1-208ENST00000464001 ERRFI1Q9UJM3 462 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 AGO1Q9UL18 857 aaKnown RBP4.39□□□□□ -1.71
ITGB1-208ENST00000464001 LINC01553A4QN01 128 aa4.38□□□□□ -1.71
ITGB1-208ENST00000464001 SKAP2O75563 359 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-208ENST00000464001 CYP4B1P13584 511 aa4.38□□□□□ -1.71
ITGB1-208ENST00000464001 C21orf33P30042 268 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-208ENST00000464001 DDIT3P35638 169 aa4.38□□□□□ -1.71
ITGB1-208ENST00000464001 MAPK9P45984 424 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms