RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 POLNQ7Z5Q5 900 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 KLK6Q92876 244 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 EXOC2Q96KP1 924 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 SSU72P8A0A1W2PR75 194 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ZSCAN5CA6NGD5 496 aaPredicted RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 MYO1FO00160 1098 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 VILLO15195 856 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 SH3BP5O60239 455 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 GSRP00390 522 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 CEACAM1P13688 526 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ITGB7P26010 798 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 CTSKP43235 329 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 SNRPD1P62314 119 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 TEAD4Q15561 434 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 PARS2Q7L3T8 475 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 ZNF564Q8TBZ8 553 aaPredicted RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 NCAPGQ9BPX3 1015 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 LHX3Q9UBR4 397 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ZFR2Q9UPR6 939 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 CA5BQ9Y2D0 317 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 CABIN1Q9Y6J0 2220 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 A0A1W2PQU0 124 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 INSIG1O15503 277 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 PRAMEF11O60813 436 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 CD48P09326 243 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ADRB3P13945 408 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 PRLRP16471 622 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 AMPD1P23109 780 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 IL4RP24394 825 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 CD38P28907 300 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 SLC14A1Q13336 389 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ZNF284Q2VY69 593 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 SEL1L3Q68CR1 1132 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ADAT2Q7Z6V5 191 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 PRPF39Q86UA1 669 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 TRIM5Q9C035 493 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 PCDH18Q9HCL0 1135 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 TM7SF3Q9NS93 570 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 ZNHIT6Q9NWK9 470 aaKnown RBP13.17□□□□□ -0.3
XRN1-203ENST00000463916 CTTNBP2NLQ9P2B4 639 aa13.17□□□□□ -0.3
XRN1-203ENST00000463916 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 C16orf96A6NNT2 1141 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 H0Y8X5 98 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 AKR1B10O60218 316 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 CER1O95813 267 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 UGT2B4P06133 528 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 IL27RAQ6UWB1 636 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TSC1Q92574 1164 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 KLHL32Q96NJ5 620 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
XRN1-203ENST00000463916 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 AKAP13Q12802 2813 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 CEP295Q9C0D2 2601 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 DFFAO00273 331 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 SLC31A1O15431 190 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 SPINT1O43278 529 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 PCDH8O95206 1070 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TPM1P09493 284 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 H2AFZP0C0S5 128 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 ABL2P42684 1182 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 RGRP47804 291 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 NEK3P51956 506 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TAS2R40P59535 323 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 RHOAP61586 193 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
XRN1-203ENST00000463916 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 NEK5Q6P3R8 708 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 FBXL19Q6PCT2 694 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 H2AFVQ71UI9 128 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TC2NQ8N9U0 490 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 CASKIN2Q8WXE0 1202 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 CTNNBL1Q8WYA6 563 aaPredicted RBP13.16□□□□□ -0.3
XRN1-203ENST00000463916 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 MYOCQ99972 504 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 FZD3Q9NPG1 666 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
XRN1-203ENST00000463916 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms