RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 GCNT7Q6ZNI0 430 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 Q6ZSR6 202 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 ZNF354CQ86Y25 554 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 SLC25A45Q8N413 288 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 RTL3Q8N8U3 475 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 OR2AP1Q8NGE2 309 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 LRIG1Q96JA1 1093 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 BMFQ96LC9 184 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 CNPY3Q9BT09 278 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 CALN1Q9BXU9 219 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 NOL6Q9H6R4 1146 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 TAS2R14Q9NYV8 317 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 FZD10Q9ULW2 581 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 SPEGQ15772 3267 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 PLXNB3Q9ULL4 1909 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 GOLGA4Q13439 2230 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 KRIT1O00522 736 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 CREB3O43889 395 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 CKMT2P17540 419 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 CLDN6P56747 220 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 CYP4F3Q08477 520 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 ZNF805Q5CZA5 627 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 ATXN7L2Q5T6C5 722 aaPredicted RBP19.16■□□□□ 0.66
SF3A1-205ENST00000463818 ABI3BPQ7Z7G0 1075 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 PDCD7Q8N8D1 485 aaKnown RBP19.16■□□□□ 0.66
SF3A1-205ENST00000463818 NETO2Q8NC67 525 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 BAP1Q92560 729 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 VOPP1Q96AW1 172 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 KLC2Q9H0B6 622 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 MYO6Q9UM54 1294 aa19.16■□□□□ 0.66
SF3A1-205ENST00000463818 ZZEF1O43149 2961 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 KNTC1P50748 2209 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 ZSCAN5CA6NGD5 496 aaPredicted RBP19.15■□□□□ 0.66
SF3A1-205ENST00000463818 IGLON5A6NGN9 336 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 SMTNL1A8MU46 457 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 TMCO5BA8MYB1 307 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 TRIM38O00635 465 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 SIGLEC6O43699 453 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 DGKAP23743 735 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 ABL2P42684 1182 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 YBEYP58557 167 aaPredicted RBP19.15■□□□□ 0.66
SF3A1-205ENST00000463818 OGDHQ02218 1023 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 SGCGQ13326 291 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 FAM174AQ8TBP5 190 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 RAB7BQ96AH8 199 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 KLHL32Q96NJ5 620 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 EPAS1Q99814 870 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 BPIFA3Q9BQP9 254 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 SYT11Q9BT88 431 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 CAAP1Q9H8G2 361 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 UCKL1Q9NWZ5 548 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 DKK4Q9UBT3 224 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 NYNRINQ9P2P1 1898 aaKnown RBP19.15■□□□□ 0.66
SF3A1-205ENST00000463818 DOCK4Q8N1I0 1966 aa19.15■□□□□ 0.66
SF3A1-205ENST00000463818 DOCK9Q9BZ29 2069 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 POM121BA6NF01 834 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 A6NNZ2 444 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 WASH4PA8MWX3 477 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 RASA4BC9J798 803 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 NEMP1O14524 444 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 RAD51BO15315 384 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 RASA4O43374 803 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 TSPAN6O43657 245 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 TMCC1O94876 653 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 UGT2B4P06133 528 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 AIF1P55008 147 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 ZNF211Q13398 564 aaPredicted RBP19.14■□□□□ 0.65
SF3A1-205ENST00000463818 MAMLD1Q13495 774 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 PROX2Q3B8N5 592 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 INO80DQ53TQ3 878 aaPredicted RBP19.14■□□□□ 0.65
SF3A1-205ENST00000463818 ZNF542PQ5EBM4 170 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 PTAR1Q7Z6K3 402 aaPredicted RBP19.14■□□□□ 0.65
SF3A1-205ENST00000463818 DCP2Q8IU60 420 aaKnown RBP19.14■□□□□ 0.65
SF3A1-205ENST00000463818 SLC22A18ASQ8N1D0 253 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 CASKIN2Q8WXE0 1202 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 HMCESQ96FZ2 354 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 C1QTNF2Q9BXJ5 285 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 CATSPERBQ9H7T0 1116 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 LHX6Q9UPM6 363 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 RAXQ9Y2V3 346 aa19.14■□□□□ 0.65
SF3A1-205ENST00000463818 DMXL2Q8TDJ6 3036 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 PIAS2O75928 621 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 DESP17661 470 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 RAD51Q06609 339 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 ILKQ13418 452 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 SERINC3Q13530 473 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 FILIP1LQ4L180 1135 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 PPP1R2P3Q6NXS1 205 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 C19orf48Q6RUI8 117 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 GDPD4Q6W3E5 623 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 TMC6Q7Z403 805 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 TTC7BQ86TV6 843 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 ZSCAN30Q86W11 494 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 UMODL1-AS1Q8N2C9 162 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 IFT43Q96FT9 208 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 GDAP1L1Q96MZ0 367 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 LENG8Q96PV6 779 aaPredicted RBP19.13■□□□□ 0.65
SF3A1-205ENST00000463818 KLF6Q99612 283 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms