RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 XPR1Q9UBH6 696 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 LZTS1Q9Y250 596 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
C9orf78-204ENST00000461762 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 PTGESO14684 152 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 VILLO15195 856 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 STRNO43815 780 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 ARNTP27540 789 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 TTLL12Q14166 644 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-204ENST00000461762 DENND5AQ6IQ26 1287 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
C9orf78-204ENST00000461762 SPATA24Q86W54 205 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 DENND6AQ8IWF6 608 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 AHI1Q8N157 1196 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 TMEM102Q8N9M5 508 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-204ENST00000461762 DNAJB3Q8WWF6 145 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 CELF6Q96J87 481 aaKnown RBP15.29■□□□□ 0.04
C9orf78-204ENST00000461762 MARK4Q96L34 752 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 KLHL32Q96NJ5 620 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 TKTL2Q9H0I9 626 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 ZCWPW1Q9H0M4 648 aa15.29■□□□□ 0.04
C9orf78-204ENST00000461762 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 SDHDO14521 159 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 PSMD8P48556 350 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 SH3BGRP55822 239 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 ADAM17P78536 824 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 MPP1Q00013 466 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 MYBPC1Q00872 1141 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 ZNF460Q14592 562 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 PPP2R5DQ14738 602 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 PDCD2Q16342 344 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 USP41Q3LFD5 358 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 DCLRE1AQ6PJP8 1040 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 PELI3Q8N2H9 469 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 RNF148Q8N7C7 305 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 SPATA22Q8NHS9 363 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 PPP1R10Q96QC0 940 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 GNEQ9Y223 722 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 AAR2Q9Y312 384 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 MYBPHLA2RUH7 354 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 CLPTM1O96005 669 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 DNAJB13P59910 316 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 CTBP1Q13363 440 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 SLC5A9Q2M3M2 681 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 ESRP1Q6NXG1 681 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 FCRL5Q96RD9 977 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 NPAS2Q99743 824 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 OMDQ99983 421 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 TBL1YQ9BQ87 522 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
C9orf78-204ENST00000461762 MRPL46Q9H2W6 279 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 CNOT11Q9UKZ1 510 aaKnown RBP15.28■□□□□ 0.04
C9orf78-204ENST00000461762 SBF1O95248 1867 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 FAM95CA0A1B0GW59 222 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 TRPC5OSA6NMA1 111 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 TMEM233B4DJY2 109 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 VAPBO95292 243 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 STMN1P16949 149 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 RGS2P41220 211 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 CDKL1Q00532 357 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 GK3PQ14409 553 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 R3HDM1Q15032 1099 aaKnown RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 CHSY3Q70JA7 882 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 CCDC117Q8IWD4 279 aaPredicted RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SPATA6LQ8N4H0 392 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 METTL25Q8N6Q8 603 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 CCNYL1Q8N7R7 359 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 CEP70Q8NHQ1 597 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 EDEM1Q92611 657 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 PCED1BQ96HM7 432 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SENP8Q96LD8 212 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 MRPL57Q9BQC6 102 aaKnown RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 MRPS26Q9BYN8 205 aaKnown RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SLC2A11Q9BYW1 496 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SUDS3Q9H7L9 328 aaPredicted RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 SCN4AP35499 1836 aa15.27■□□□□ 0.04
C9orf78-204ENST00000461762 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.04
C9orf78-204ENST00000461762 TRIM38O00635 465 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 RNASEH2AO75792 299 aaKnown RBP15.27■□□□□ 0.03
C9orf78-204ENST00000461762 TNFAIP8O95379 198 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 F2P00734 622 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 SPATA31D3P0C874 917 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 CCNCP24863 283 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 HSPA13P48723 471 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 COG7P83436 770 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 ARMC3Q5W041 872 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 ARHGAP36Q6ZRI8 547 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 PIWIL4Q7Z3Z4 852 aaKnown RBP15.27■□□□□ 0.03
C9orf78-204ENST00000461762 TXNDC5Q8NBS9 432 aaKnown RBP15.27■□□□□ 0.03
C9orf78-204ENST00000461762 USP33Q8TEY7 942 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 ZNF419Q96HQ0 510 aaPredicted RBP15.27■□□□□ 0.03
C9orf78-204ENST00000461762 MAML3Q96JK9 1138 aa15.27■□□□□ 0.03
C9orf78-204ENST00000461762 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms