RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	PCP4	P48539	62 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	GLUD2	P49448	558 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	CYP2J2	P51589	502 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	PMS2	P54278	862 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	CDK18	Q07002	472 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	DSC1	Q08554	894 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	KRT81	Q14533	505 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	TTC22	Q5TAA0	569 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	RAB11FIP2	Q7L804	512 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	ZNF367	Q7RTV3	350 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	FAM9B	Q8IZU0	186 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	VPS33B	Q9H267	617 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	CPS1	P31327	1500 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	DLC1	Q96QB1	1528 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	NKTR	P30414	1462 aa	Known RBP	4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	RALGAPB	Q86X10	1494 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	DCC	P43146	1447 aa		4.55	□□□□□ -1.68
UBA3-204	ENST00000461522	ADGRB1	O14514	1584 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	KIF1B	O60333	1816 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522		A0A087WV62	115 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	NPIPB13	A6NJU9	1138 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	NPIPB5	A8MRT5	1133 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	NPIPB4	C9JG80	1138 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	SYT5	O00445	386 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	ACTL6B	O94805	426 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	ITGA2B	P08514	1039 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	GNLY	P22749	145 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	TYK2	P29597	1187 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	PNLIPRP1	P54315	467 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	HYAL1	Q12794	435 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	PFKFB4	Q16877	469 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	ZACN	Q401N2	412 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	GALNTL6	Q49A17	601 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	C5orf22	Q49AR2	442 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	GLIPR1L2	Q4G1C9	344 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	MTFR2	Q6P444	385 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	ZNF527	Q8NB42	609 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	LMO3	Q8TAP4	145 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	LMLN	Q96KR4	655 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	APOLD1	Q96LR9	279 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	FRG2B	Q96QU4	278 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	TESK2	Q96S53	571 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	TM6SF1	Q9BZW5	370 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	ABHD16B	Q9H3Z7	469 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	PRDM8	Q9NQV8	689 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	CHST12	Q9NRB3	414 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	HERC5	Q9UII4	1024 aa	Known RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	SLC25A13	Q9UJS0	675 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	RCE1	Q9Y256	329 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	CFAP65	Q6ZU64	1925 aa	Known RBP	4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	PTPRU	Q92729	1446 aa		4.54	□□□□□ -1.68
UBA3-204	ENST00000461522	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	SAC3D1	A6NKF1	404 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	IFITM10	A6NMD0	228 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	VWA5A	O00534	786 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	LIAS	O43766	372 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	TOM1	O60784	492 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	TMCC1	O94876	653 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PPP1R3D	O95685	299 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	CYP21A2	P08686	494 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	MYZAP	P0CAP1	466 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PRKCH	P24723	683 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PDIA3	P30101	505 aa	Known RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	AVPR1A	P37288	418 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PPP3CC	P48454	512 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	ART1	P52961	327 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	GAS1	P54826	345 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	RRP1	P56182	461 aa	Known RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	GALNT1	Q10472	559 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	DCTN1	Q14203	1278 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	FSCB	Q5H9T9	825 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PRAMEF19	Q5SWL8	479 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	KRTAP5-11	Q6L8G4	156 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	HEPHL1	Q6MZM0	1159 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	RNF144B	Q7Z419	303 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	SMC5	Q8IY18	1101 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	HORMAD2	Q8N7B1	307 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	SCAMP5	Q8TAC9	235 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	HDAC7	Q8WUI4	952 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	ZNF333	Q96JL9	665 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PRAM1	Q96QH2	718 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PIGS	Q96S52	555 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PABPC3	Q9H361	631 aa	Known RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	RMI1	Q9H9A7	625 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	RAP2C	Q9Y3L5	183 aa		4.53	□□□□□ -1.68
UBA3-204	ENST00000461522	STRC	Q7RTU9	1775 aa		4.53	□□□□□ -1.69
UBA3-204	ENST00000461522	BRD4	O60885	1362 aa	Predicted RBP	4.53	□□□□□ -1.69
UBA3-204	ENST00000461522	TMEM94	Q12767	1356 aa		4.53	□□□□□ -1.69
UBA3-204	ENST00000461522	KIAA1210	Q9ULL0	1709 aa		4.52	□□□□□ -1.69
UBA3-204	ENST00000461522	EVC2	Q86UK5	1308 aa		4.52	□□□□□ -1.69
UBA3-204	ENST00000461522	TMEM247	A6NEH6	219 aa		4.52	□□□□□ -1.69
UBA3-204	ENST00000461522	LDB2	O43679	373 aa		4.52	□□□□□ -1.69
UBA3-204	ENST00000461522	PEX14	O75381	377 aa		4.52	□□□□□ -1.69

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