RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 TXNDC5Q8NBS9 432 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 OR10H5Q8NGA6 315 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 LILRB1Q8NHL6 650 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 POF1BQ8WVV4 589 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ATXN2LQ8WWM7 1075 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 HVCN1Q96D96 273 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TBC1D31Q96DN5 1066 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TOX2Q96NM4 488 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ADAM2Q99965 735 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FAM213AQ9BRX8 229 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 MSTO1Q9BUK6 570 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 NFKBIZQ9BYH8 718 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 C11orf54Q9H0W9 315 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 KCNH6Q9H252 994 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ST6GALNAC4Q9H4F1 302 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 MMRN2Q9H8L6 949 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CERS4Q9HA82 394 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RLIMQ9NVW2 624 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 GPRC5BQ9NZH0 403 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RWDD2AQ9UIY3 292 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 LRCH1Q9Y2L9 728 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RRP15Q9Y3B9 282 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 SQORQ9Y6N5 450 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 VWA8A3KMH1 1905 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TSC2P49815 1807 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CEP290O15078 2479 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PLXNA4Q9HCM2 1894 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 EYSQ5T1H1 3165 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 A0A0B4J269 797 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 POM121BA6NF01 834 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 PRRT4C9JH25 899 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 PDXKO00764 312 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 OGTO15294 1046 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CLDN3O15551 220 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ARHGAP6O43182 974 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 NCK2O43639 380 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CALUO43852 315 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 B4GALT3O60512 393 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 FOXD2O60548 495 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TOM1L1O75674 476 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MATN4O95460 622 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CXCL10P02778 98 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CYP1A1P04798 512 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CD1AP06126 327 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 STAG3L1P0CL83 205 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MTHFD1P11586 935 aaKnown RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 BRAFP15056 766 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MLH1P40692 756 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 HALP42357 657 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MAGEA10P43363 369 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 IRAK1P51617 712 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 EFNA5P52803 228 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 SUMO3P55854 103 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 HTRA4P83105 476 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MYL5Q02045 173 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MRPL49Q13405 166 aaKnown RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ALCAMQ13740 583 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 SSPNQ14714 243 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 PDCD2Q16342 344 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TBR1Q16650 682 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TPD52L1Q16890 204 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 DCAF17Q5H9S7 520 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 SLC27A1Q6PCB7 646 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 SYDE1Q6ZW31 735 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 NEK10Q6ZWH5 1172 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 STXBP4Q6ZWJ1 553 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 GPR155Q7Z3F1 870 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 FRMD5Q7Z6J6 570 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TMEM110Q86TL2 294 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ZC3H3Q8IXZ2 948 aaKnown RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 SLC7A5P1Q8MH63 180 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CSGALNACT2Q8N6G5 542 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 NKAIN3Q8N8D7 197 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ANKRD53Q8N9V6 530 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MYRIPQ8NFW9 859 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ZSCAN18Q8TBC5 510 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 MDM1Q8TC05 714 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ADAMTS17Q8TE56 1095 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 STON2Q8WXE9 905 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 RABGGTAQ92696 567 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 N4BP2L2Q92802 583 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 KIAA1191Q96A73 305 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 DHTKD1Q96HY7 919 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TSG101Q99816 390 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TCHPQ9BT92 498 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CRB3Q9BUF7 120 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 VPS11Q9H270 941 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 ADAM7Q9H2U9 754 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TMEM206Q9H813 350 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 GOLGA2P5Q9HBQ8 144 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 PDE11AQ9HCR9 933 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 DMAC2Q9NW81 257 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 TAB2Q9NYJ8 693 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
SF3A3-202ENST00000460925 AFF4Q9UHB7 1163 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms