RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KCNK1O00180 336 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 ZNF217O75362 1048 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 RNASEH2AO75792 299 aaKnown RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 PRNPP04156 253 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 HLA-DQB2P05538 268 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 UGT2B4P06133 528 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 C5AR1P21730 350 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 SLC8A1P32418 973 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 ADPRHP54922 357 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 MAXP61244 160 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 NOMO1Q15155 1222 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 USP39Q53GS9 565 aaKnown RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 AGBL4Q5VU57 503 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 PMS2CLQ68D20 193 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 CEP68Q76N32 757 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 PARS2Q7L3T8 475 aaKnown RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 CCDC13Q8IYE1 715 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 C17orf53Q8N3J3 647 aaPredicted RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 HEPHQ9BQS7 1158 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
COL18A1-206ENST00000459895 ATXN2Q99700 1313 aaKnown RBP13.01□□□□□ -0.33
COL18A1-206ENST00000459895 NUMA1Q14980 2115 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 KCNK3O14649 394 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ENC1O14682 589 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CR2P20023 1033 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CCNCP24863 283 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ITGB7P26010 798 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CD6P30203 668 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ACSL1P33121 698 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CNR2P34972 360 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 IFI35P80217 286 aaPredicted RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 RPL6Q02878 288 aaKnown RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 AP1B1Q10567 949 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CNTN1Q12860 1018 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 SIM2Q14190 667 aaPredicted RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 PDK1Q15118 436 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 RPS6KA1Q15418 735 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 PLK5Q496M5 336 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ARSIQ5FYB1 569 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 PIP5KL1Q5T9C9 394 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 CCDC181Q5TID7 509 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 USP30Q70CQ3 517 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ARMCX6Q7L4S7 300 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ZC3H18Q86VM9 953 aaKnown RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 PLPP6Q8IY26 295 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 TEX26Q8N6G2 289 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ACTL9Q8TC94 416 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 P3H4Q92791 437 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 FATE1Q969F0 183 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 TOE1Q96GM8 510 aaKnown RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 TSGA13Q96PP4 275 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 DUSP15Q9H1R2 295 aaPredicted RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 CARD9Q9H257 536 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 NT5MQ9NPB1 228 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 ITM2CQ9NQX7 267 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 FZD4Q9ULV1 537 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 SCML1Q9UN30 329 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 R3HDM2Q9Y2K5 976 aaKnown RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
COL18A1-206ENST00000459895 LRRK1Q38SD2 2015 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 SCN8AQ9UQD0 1980 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 MYLKQ15746 1914 aa13□□□□□ -0.33
COL18A1-206ENST00000459895 MATN3O15232 486 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 SPINT1O43278 529 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 ATP1A1P05023 1023 aaKnown RBP12.99□□□□□ -0.33
COL18A1-206ENST00000459895 CCNB1P14635 433 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 ABL2P42684 1182 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 NR2C2P49116 596 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 AP1S1P61966 158 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 DSC2Q02487 901 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 MYLK3Q32MK0 819 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 LRRC73Q5JTD7 316 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 FAM46CQ5VWP2 391 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 ZSWIM9Q86XI8 627 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 HDDC3Q8N4P3 179 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 SUMF1Q8NBK3 374 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 TMIEQ8NEW7 156 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 GANCQ8TET4 914 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 PPP1R16AQ96I34 528 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 OMDQ99983 421 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 WSB2Q9NYS7 404 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms