RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 NNTQ13423 1086 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 UBAP2LQ14157 1087 aaKnown RBP11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 DLG2Q15700 870 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 CXorf57Q6NSI4 855 aaKnown RBP11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 OR52K2Q8NGK3 314 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 SLC35F5Q8WV83 523 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 TFAP2BQ92481 460 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 KAT5Q92993 513 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 PDLIM2Q96JY6 352 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 BMFQ96LC9 184 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 MIS12Q9H081 205 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 SYNDIG1Q9H7V2 258 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 UBE2TQ9NPD8 197 aaPredicted RBP11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 AJAP1Q9UKB5 411 aaPredicted RBP11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 NAALADL1Q9UQQ1 740 aa11.53□□□□□ -0.56
PRAMEF35P-201ENST00000458709 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.56
PRAMEF35P-201ENST00000458709 POM121BA6NF01 834 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 H3BM21 787 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 M0QYV0 167 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 AQP9O43315 295 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 APOEP02649 317 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CSF2P04141 144 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 RPL34P49207 117 aaKnown RBP11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CLCN6P51797 869 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PLK1P53350 603 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 BPIFB4P59827 614 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 APBA1Q02410 837 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CENPCQ03188 943 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SLC12A1Q13621 1099 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 FGL2Q14314 439 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 NR0B2Q15466 257 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 STILQ15468 1287 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 ZC3H12AQ5D1E8 599 aaKnown RBP11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TPRG1LQ5T0D9 272 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 NEK5Q6P3R8 708 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 XKR5Q6UX68 686 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 KYAT3Q6YP21 454 aaKnown RBP11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 B3GNT8Q7Z7M8 397 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PARGQ86W56 976 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 ZNF677Q86XU0 584 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 JAMLQ86YT9 394 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CREBRFQ8IUR6 639 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SLC35F3Q8IY50 421 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TPCN2Q8NHX9 752 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 FAM149B1Q96BN6 582 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 ALG14Q96F25 216 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 NCKIPSDQ9NZQ3 722 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SLC25A13Q9UJS0 675 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CSNK1G3Q9Y6M4 447 aa11.52□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TLN1Q9Y490 2541 aaKnown RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TCAF2A6NFQ2 919 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 F5H5T6 163 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PES1O00541 588 aaKnown RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PLD2O14939 933 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 RAD51BO15315 384 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 MFAP3LO75121 409 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PCDH8O95206 1070 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 ADCY5O95622 1261 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CALCAP01258 141 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CCDC172P0C7W6 258 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 HGFP14210 728 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CR2P20023 1033 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CDH5P33151 784 aaPredicted RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CLCN1P35523 988 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SOX5P35711 763 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 IRAK1P51617 712 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PITX1P78337 314 aaPredicted RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SPIDRQ14159 915 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 TBR1Q16650 682 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SYPL2Q5VXT5 272 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 IRF2BP2Q7Z5L9 587 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 C14orf80Q86SX3 495 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 VASH2Q86V25 355 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CNGA4Q8IV77 575 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 RBFAQ8N0V3 343 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SH2D3CQ8N5H7 860 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 LMX1AQ8TE12 382 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 EPS8L1Q8TE68 723 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 LIN37Q96GY3 246 aaPredicted RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 IL12RB2Q99665 862 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PRMT1Q99873 361 aaKnown RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SEMA3CQ99985 751 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 CCDC3Q9BQI4 270 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 NOCTQ9UK39 431 aaKnown RBP11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
PRAMEF35P-201ENST00000458709 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms