RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 A0A1W2PR77 199 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 H3BRJ5 948 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 VILLO15195 856 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 LCA5LO95447 670 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ZNF883P0CG24 379 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 AMPD1P23109 780 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 MAN1A1P33908 653 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ARL4AP40617 200 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 MAPK8P45983 427 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 PPP2CBP62714 309 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 PPP2CAP67775 309 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 GRIK2Q13002 908 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 SMTNL2Q2TAL5 461 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ZNF805Q5CZA5 627 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 IL27RAQ6UWB1 636 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 DBX2Q6ZNG2 339 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 NPWQ8N729 165 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 HSPH1Q92598 858 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 PPP1R16AQ96I34 528 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 CELF6Q96J87 481 aaKnown RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 TM6SF2Q9BZW4 377 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.54□□□□□ -0.24
COMMD1-206ENST00000458337 ETNK2Q9NVF9 386 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 LHX3Q9UBR4 397 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 DMTF1Q9Y222 760 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 TRPM6Q9BX84 2022 aa13.54□□□□□ -0.24
COMMD1-206ENST00000458337 WNT9AO14904 365 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 AP1G1O43747 822 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 OPHN1O60890 802 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 KCNK5O95279 499 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 CD59P13987 128 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 GKP32189 559 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 CSNK1DP48730 415 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 NEK3P51956 506 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 IL10RBQ08334 325 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
COMMD1-206ENST00000458337 TEAD4Q15561 434 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 HLA-BQ31612 363 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 UAP1L1Q3KQV9 507 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 PPM1JQ5JR12 505 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 ATXN7L2Q5T6C5 722 aaPredicted RBP13.53□□□□□ -0.24
COMMD1-206ENST00000458337 PRPF39Q86UA1 669 aaKnown RBP13.53□□□□□ -0.24
COMMD1-206ENST00000458337 ZNF354CQ86Y25 554 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 CPNE8Q86YQ8 564 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 GDAP1L1Q96MZ0 367 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 OSBPL1AQ9BXW6 950 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 UBA2Q9UBT2 640 aaPredicted RBP13.53□□□□□ -0.24
COMMD1-206ENST00000458337 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
COMMD1-206ENST00000458337 C16orf96A6NNT2 1141 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 KRIT1O00522 736 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 RNGTTO60942 597 aaKnown RBP13.52□□□□□ -0.25
COMMD1-206ENST00000458337 WNT1P04628 370 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 CEACAM1P13688 526 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 ADRB3P13945 408 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 FECHP22830 423 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 CD38P28907 300 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 CTSKP43235 329 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 CDH6P55285 790 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 TAS2R40P59535 323 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 RHOAP61586 193 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 RAD51Q06609 339 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.25
COMMD1-206ENST00000458337 PDK2Q15119 407 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 ZNF284Q2VY69 593 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 GDPD4Q6W3E5 623 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 PARS2Q7L3T8 475 aaKnown RBP13.52□□□□□ -0.25
COMMD1-206ENST00000458337 IQCHQ86VS3 1027 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 HORMAD1Q86X24 394 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 TP53INP2Q8IXH6 220 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 CCDC170Q8IYT3 715 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 MFSD2AQ8NA29 543 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 OR6K2Q8NGY2 324 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 RAB7BQ96AH8 199 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 SERAC1Q96JX3 654 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 SLC6A18Q96N87 628 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 ZNF599Q96NL3 588 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 PANX2Q96RD6 677 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 GAREM1Q9H706 876 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 DKK3Q9UBP4 350 aa13.52□□□□□ -0.25
COMMD1-206ENST00000458337 IPO11Q9UI26 975 aaKnown RBP13.52□□□□□ -0.25
COMMD1-206ENST00000458337 ZFR2Q9UPR6 939 aaKnown RBP13.52□□□□□ -0.25
COMMD1-206ENST00000458337 PCDHGB2Q9Y5G2 931 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms