RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PRAMEF11O60813 436 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 RNGTTO60942 597 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 KRT7P08729 469 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 ITGB7P26010 798 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 GKP32189 559 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 CYLC1P35663 651 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 NUDT1P36639 197 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 MAGEA1P43355 309 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 RACK1P63244 317 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 SLC25A11Q02978 314 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 DPYSQ14117 519 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 ODF2Q5BJF6 829 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 PPM1JQ5JR12 505 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 TXNRD3NBQ6F5E7 133 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 PAF1Q8N7H5 531 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 OR2I1PQ8NGU4 316 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 CSPG4P5Q96PW8 444 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 CALN1Q9BXU9 219 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 OSBPL1AQ9BXW6 950 aa18.36■□□□□ 0.53
PDLIM2-215ENST00000456545 NEMP1O14524 444 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 CER1O95813 267 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 UGT2B4P06133 528 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 SERPINB6P35237 376 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 ARHGAP25P42331 645 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 NOP2P46087 812 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 GRIA4P48058 902 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 PPP2CBP62714 309 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 PPP2CAP67775 309 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 STAT4Q14765 748 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 CYTH1Q15438 398 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 SETMARQ53H47 684 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 ZNF805Q5CZA5 627 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 PIP5KL1Q5T9C9 394 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 NEK5Q6P3R8 708 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 GDPD4Q6W3E5 623 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 C1orf216Q8TAB5 229 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 NSMCE1Q8WV22 266 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 FEM1CQ96JP0 617 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 SLC6A18Q96N87 628 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 KLHL32Q96NJ5 620 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 CINPQ9BW66 212 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 GAREM1Q9H706 876 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 IPO11Q9UI26 975 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 INTUQ9ULD6 942 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 ANKRD6Q9Y2G4 727 aa18.35■□□□□ 0.53
PDLIM2-215ENST00000456545 A0A1W2PQU0 124 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 IPO7O95373 1038 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 ADRB3P13945 408 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 XPAP23025 273 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 CD38P28907 300 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 FOXK2Q01167 660 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 IL10RBQ08334 325 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 GRM3Q14832 879 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 PDK2Q15119 407 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 HLA-BQ31612 363 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 ATP13A4Q4VNC1 1196 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 CFAP58Q5T655 872 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 TTC7BQ86TV6 843 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 ARHGAP12Q8IWW6 846 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 CCDC170Q8IYT3 715 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 NPWQ8N729 165 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 KLK6Q92876 244 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 EXOC2Q96KP1 924 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 RCOR3Q9P2K3 495 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 DMTF1Q9Y222 760 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 SLCO1B1Q9Y6L6 691 aa18.34■□□□□ 0.53
PDLIM2-215ENST00000456545 C16orf96A6NNT2 1141 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 RNF103O00237 685 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 TM4SF5O14894 197 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 SLC31A1O15431 190 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 MAN1A1P33908 653 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 NOVA1P51513 510 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 TAS2R38P59533 333 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 TAS2R40P59535 323 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 MMRN1Q13201 1228 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 RFTN1Q14699 578 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 KIF19Q2TAC6 998 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 AFMIDQ63HM1 303 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 NAPEPLDQ6IQ20 393 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 HORMAD1Q86X24 394 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 BBS5Q8N3I7 341 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 RAB7BQ96AH8 199 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 PANX2Q96RD6 677 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 EBF2Q9HAK2 575 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 PDFQ9HBH1 243 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 ETNK2Q9NVF9 386 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 DNAAF2Q9NVR5 837 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 SNX11Q9Y5W9 270 aa18.33■□□□□ 0.52
PDLIM2-215ENST00000456545 PRAMEF26H0Y7S4 382 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 VILLO15195 856 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 LATO43561 262 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 MAGEC1O60732 1142 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 KCNK5O95279 499 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 TNNT1P13805 278 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 RENBPP51606 427 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 SLC14A1Q13336 389 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms