RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 C3orf38Q5JPI3 329 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 ACBD5Q5T8D3 534 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-206ENST00000456380 SMYD5Q6GMV2 418 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 ZNF783Q6ZMS7 281 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 BNIPLQ7Z465 357 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
TRA2B-206ENST00000456380 VOPP1Q96AW1 172 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 ATXN7L3BQ96GX2 97 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-206ENST00000456380 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 HAPLN3Q96S86 360 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 C1QTNF2Q9BXJ5 285 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 DPH1Q9BZG8 443 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 ATP13A1Q9HD20 1204 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 EVA1BQ9NVM1 165 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 IPO11Q9UI26 975 aaKnown RBP12.62□□□□□ -0.39
TRA2B-206ENST00000456380 PAXBP1Q9Y5B6 917 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 H3BM21 787 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 FPGTO14772 594 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 CASC3O15234 703 aaKnown RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 JUNDP17535 347 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 GKP32189 559 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 SCNN1AP37088 669 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ABL2P42684 1182 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 PFN3P60673 137 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 SKOR1P84550 965 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 GNA12Q03113 381 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 SGCGQ13326 291 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 C2CD6Q53TS8 623 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 FAM102AQ5T9C2 384 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 DPY19L2P1Q6NXN4 242 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 EFL1Q7Z2Z2 1120 aaKnown RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TMEM35BQ8NCS4 154 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 LMX1AQ8TE12 382 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 SNRNP27Q8WVK2 155 aaKnown RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 COL26A1Q96A83 441 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 C18orf8Q96DM3 657 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 HECAQ9UBI9 543 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 GGT7Q9UJ14 662 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 SALL4Q9UJQ4 1053 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 PNMA8BQ9ULN7 279 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ENTPD2Q9Y5L3 495 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 PMS2P1A4D2B8 440 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 CAPN8A6NHC0 703 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 J3QKU1 62 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 GCATO75600 419 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ACVRL1P37023 503 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 VAC14Q08AM6 782 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 FAM131BQ86XD5 332 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TTC9Q92623 222 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ISG20Q96AZ6 181 aaKnown RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ZYG11BQ9C0D3 744 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TCEAL2Q9H3H9 227 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ZDHHC6Q9H6R6 413 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 NDFIP2Q9NV92 336 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TMEM51Q9NW97 253 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 NCKIPSDQ9NZQ3 722 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 TMEM59LQ9UK28 342 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 ITM2BQ9Y287 266 aa12.61□□□□□ -0.39
TRA2B-206ENST00000456380 RP1P56715 2156 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 TPP1O14773 563 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 TSPAN6O43657 245 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 CYP11B1P15538 503 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 RBMS1P29558 406 aaKnown RBP12.6□□□□□ -0.39
TRA2B-206ENST00000456380 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
TRA2B-206ENST00000456380 BPIFB4P59827 614 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 LY6DQ14210 128 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 PERM1Q5SV97 790 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 ASB12Q8WXK4 309 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 CENPTQ96BT3 561 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 PPARGC1AQ9UBK2 798 aaKnown RBP12.6□□□□□ -0.39
TRA2B-206ENST00000456380 PCDHGA8Q9Y5G5 932 aa12.6□□□□□ -0.39
TRA2B-206ENST00000456380 COL27A1Q8IZC6 1860 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-206ENST00000456380 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms