RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 CINPQ9BW66 212 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 CPEB1Q9BZB8 566 aaKnown RBP18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 HECAQ9UBI9 543 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 SERGEFQ9UGK8 458 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 IL36AQ9UHA7 158 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 AMACRQ9UHK6 382 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 SCML1Q9UN30 329 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 ATP8A1Q9Y2Q0 1164 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 RALGAPA1Q6GYQ0 2036 aa18.91■□□□□ 0.62
SBDSP1-205ENST00000456312 OTOGLQ3ZCN5 2332 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 GPR179Q6PRD1 2367 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 IGHV1OR15-9A0A0B4J2B8 117 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 HACD1B0YJ81 288 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 KCNK1O00180 336 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 LEFTY1O75610 366 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 IGSF6O95976 241 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 ADH1BP00325 375 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 HLA-DQB2P05538 268 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 CCNB1P14635 433 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 C5AR1P21730 350 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 HSPA9P38646 679 aaKnown RBP18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 MMP13P45452 471 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 TPMTP51580 245 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 WASHC5Q12768 1159 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 MYLK3Q32MK0 819 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 SLC45A4Q5BKX6 768 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 MARC1Q5VT66 337 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 KIAA1324Q6UXG2 1013 aaKnown RBP18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 CACUL1Q86Y37 369 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 OR6K2Q8NGY2 324 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 SLC35B2Q8TB61 432 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 ARRDC3Q96B67 414 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 LRIG1Q96JA1 1093 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 CCDC114Q96M63 670 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 BCCIPQ9P287 314 aaKnown RBP eCLIP18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 EVLQ9UI08 416 aaPredicted RBP18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 MBD1Q9UIS9 605 aaPredicted RBP18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 ZKSCAN5Q9Y2L8 839 aa18.9■□□□□ 0.62
SBDSP1-205ENST00000456312 BNIP3LO60238 219 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 POP4O95707 220 aaKnown RBP18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 PRNPP04156 253 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 CXCR5P32302 372 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 SLC8A1P32418 973 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 PSMD8P48556 350 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 RENBPP51606 427 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 PTPN5P54829 565 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 SRSF5Q13243 272 aaKnown RBP18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 ARSIQ5FYB1 569 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 FAM182AQ5T1J6 154 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 NCEH1Q6PIU2 408 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 USP30Q70CQ3 517 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 DSG4Q86SJ6 1040 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 ZC3H18Q86VM9 953 aaKnown RBP18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 CCNYQ8ND76 341 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 ARRDC2Q8TBH0 407 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 TFB1MQ8WVM0 346 aaKnown RBP18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 GAB3Q8WWW8 586 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 RLN3Q8WXF3 142 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 NUDCD1Q96RS6 583 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 TTC7AQ9ULT0 858 aaPredicted RBP18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 SNX12Q9UMY4 172 aa18.89■□□□□ 0.61
SBDSP1-205ENST00000456312 SCN8AQ9UQD0 1980 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 TSPAN11A1L157 253 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 TRAFD1O14545 582 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 RNASEH1O60930 286 aaKnown RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 ZNF217O75362 1048 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 IL1BP01584 269 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 DNTTP04053 509 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 BCKDHBP21953 392 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 PTPN3P26045 913 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 CNR2P34972 360 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 RECQLP46063 649 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 MAXP61244 160 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 GNG11P61952 73 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 AP1B1Q10567 949 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 ZNF235Q14590 738 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 PIP5KL1Q5T9C9 394 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 AGBL4Q5VU57 503 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 PAPD7Q5XG87 772 aaKnown RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 NYAP1Q6ZVC0 841 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 SRLQ86TD4 932 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 FAM160A2Q8N612 972 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 TTC13Q8NBP0 860 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 GRIN3AQ8TCU5 1115 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 SPOCK2Q92563 424 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 ECHDC3Q96DC8 303 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 OSBPL9Q96SU4 736 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 FAM118BQ9BPY3 351 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 ZDHHC6Q9H6R6 413 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 USP29Q9HBJ7 922 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 NT5MQ9NPB1 228 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 RBM22Q9NW64 420 aaKnown RBP eCLIP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 FARP1Q9Y4F1 1045 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 CACNA1EQ15878 2313 aa18.88■□□□□ 0.61
SBDSP1-205ENST00000456312 A0A1W2PP55 124 aa18.87■□□□□ 0.61
SBDSP1-205ENST00000456312 TTC24A2A3L6 582 aaPredicted RBP18.87■□□□□ 0.61
SBDSP1-205ENST00000456312 BCLAF3A2AJT9 711 aaKnown RBP18.87■□□□□ 0.61
SBDSP1-205ENST00000456312 C1QTNF3-AMACRE9PGA6 284 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms