RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TM6SF2Q9BZW4 377 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 SLC39A8Q9C0K1 460 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 EBF2Q9HAK2 575 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 TM9SF3Q9HD45 589 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 MAP1BP46821 2468 aaKnown RBP17.63■□□□□ 0.41
USP39-208ENST00000455732 CEP295Q9C0D2 2601 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 FAM47DPA6NHR8 397 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 KPNA3O00505 521 aaPredicted RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 LEFTY1O75610 366 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 CD59P13987 128 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 CSNK1EP49674 416 aaKnown RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 PAPOLAP51003 745 aaKnown RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 DNA2P51530 1060 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 AFF3P51826 1226 aaKnown RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 ARSIQ5FYB1 569 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 DEFB124Q8NES8 71 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 VOPP1Q96AW1 172 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 ARRDC3Q96B67 414 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 PREBQ9HCU5 417 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 HECAQ9UBI9 543 aaPredicted RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 UBA2Q9UBT2 640 aaPredicted RBP17.62■□□□□ 0.41
USP39-208ENST00000455732 TRPM6Q9BX84 2022 aa17.62■□□□□ 0.41
USP39-208ENST00000455732 KMT2BQ9UMN6 2715 aaPredicted RBP17.61■□□□□ 0.41
USP39-208ENST00000455732 A0A1B0GVT2 93 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 A0A1W2PPC4 97 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 RNF103O00237 685 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 PLK4O00444 970 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 LATO43561 262 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 KRT7P08729 469 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 IL4RP24394 825 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 ITGB7P26010 798 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 PMLP29590 882 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 CDC25BP30305 580 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
USP39-208ENST00000455732 GRIA4P48058 902 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 CDH6P55285 790 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 TAS2R40P59535 323 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 SLC14A1Q13336 389 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 ST3GAL2Q16842 350 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 POM121L1PQ3SYA9 428 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 TMCO3Q6UWJ1 677 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 LEKR1Q6ZMV7 388 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 ERN2Q76MJ5 926 aaKnown RBP17.61■□□□□ 0.41
USP39-208ENST00000455732 TRIM69Q86WT6 500 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 CPNE8Q86YQ8 564 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 GDAP1L1Q96MZ0 367 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 ZNF670Q9BS34 389 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 OSBPL1AQ9BXW6 950 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 DYRK4Q9NR20 520 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 ANGPTL2Q9UKU9 493 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 MFHAS1Q9Y4C4 1052 aa17.61■□□□□ 0.41
USP39-208ENST00000455732 J3KR12 359 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 POP4O95707 220 aaKnown RBP17.6■□□□□ 0.41
USP39-208ENST00000455732 IGSF6O95976 241 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 AMPD1P23109 780 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 SERPINB6P35237 376 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
USP39-208ENST00000455732 NUDT1P36639 197 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
USP39-208ENST00000455732 TAS2R38P59533 333 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 RHOAP61586 193 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 RACK1P63244 317 aaKnown RBP17.6■□□□□ 0.41
USP39-208ENST00000455732 DPYSL3Q14195 570 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 KRT81Q14533 505 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 RFTN1Q14699 578 aaPredicted RBP17.6■□□□□ 0.41
USP39-208ENST00000455732 PDK2Q15119 407 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 CYTH1Q15438 398 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 MYLK3Q32MK0 819 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 NEK5Q6P3R8 708 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 IL27RAQ6UWB1 636 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 TMTC1Q8IUR5 882 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 ZDHHC6Q9H6R6 413 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 IL21RQ9HBE5 538 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 LHX3Q9UBR4 397 aa17.6■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3DA0A087WVF3 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3IA0A087WXS9 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3EA0A087X179 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3KA0A087X1G2 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3FA6NER0 549 aaPredicted RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3LB9A6J9 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 DFFAO00273 331 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 CD48P09326 243 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3HP0C7X1 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 ZNF883P0CG24 379 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 MAGEA1P43355 309 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 NEK3P51956 506 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 PPP2CBP62714 309 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 PPP2CAP67775 309 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 IL10RBQ08334 325 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 MESDQ14696 234 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TEAD4Q15561 434 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 KIF19Q2TAC6 998 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 HLA-BQ31612 363 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 ATXN7L2Q5T6C5 722 aaPredicted RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3GQ6DHY5 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 TBC1D3CQ6IPX1 549 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 LAYNQ6UX15 382 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 MAP7D3Q8IWC1 876 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms