RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 OR51B4Q9Y5P0 310 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ZCWPW2A0A1B0GU75 182 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 C2orf78A6NCI8 922 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 MROH6A6NGR9 719 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SOCS5O75159 536 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 H2AFYO75367 372 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CRTAMO95727 393 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CKMP06732 381 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 DHRS4L1P0CG22 281 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CR2P20023 1033 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CD9P21926 228 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NFKBIAP25963 317 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SLCO1A2P46721 670 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 LIMK2P53671 638 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SESN2P58004 480 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ERVFC1P60507 584 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 GAD2Q05329 585 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 USP4Q13107 963 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PDK4Q16654 411 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 FAXCQ5TGI0 409 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 IL31Q6EBC2 164 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CXorf57Q6NSI4 855 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PRPF39Q86UA1 669 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 AGGF1Q8N302 714 aaeCLIP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 EFHBQ8N7U6 833 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PPM1NQ8N819 430 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 KDM1BQ8NB78 822 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 OR52K1Q8NGK4 314 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 RDH11Q8TC12 318 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 BRSK1Q8TDC3 778 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ADAMTS19Q8TE59 1207 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 STYXQ8WUJ0 223 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 DYDC1Q8WWB3 177 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 STON2Q8WXE9 905 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF317Q96PQ6 595 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SIKE1Q9BRV8 207 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 FEM1AQ9BSK4 669 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 MCMBPQ9BTE3 642 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ATXN3LQ9H3M9 355 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PLAC1Q9HBJ0 212 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 TREX1Q9NSU2 369 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SYBUQ9NX95 663 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 GRID1Q9ULK0 1009 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CPQQ9Y646 472 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ANKRD36A6QL64 1941 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 INSIG1O15503 277 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 GLRA3O75311 464 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 AVILO75366 819 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ZMPSTE24O75844 475 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ASMTLO95671 621 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PENKP01210 267 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 HMBSP08397 361 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 AVPR1AP37288 418 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SERPINB8P50452 374 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NEK3P51956 506 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NAA20P61599 178 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC10A7Q0GE19 358 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ITIH4Q14624 930 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC1A5Q15758 541 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CCDC153Q494R4 210 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PREPLQ4J6C6 727 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SPDYAQ5MJ70 313 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 GKAP1Q5VSY0 366 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 HHATQ5VTY9 493 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 PACS1Q6VY07 963 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 TFAP2DQ7Z6R9 452 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 CTAGE3PQ8IX95 158 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NDUFAF2Q8N183 169 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ARL14EPQ8N8R7 260 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ANKS4BQ8N8V4 417 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 WFIKKN2Q8TEU8 576 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 RBBP8Q99708 897 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 IQCGQ9H095 443 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 RHOJQ9H4E5 214 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 FAM96AQ9H5X1 160 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 SFXN1Q9H9B4 322 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 TRPV4Q9HBA0 871 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NT5MQ9NPB1 228 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 KCNK9Q9NPC2 374 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 MAN1C1Q9NR34 630 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.33e-6■■■■□ 21.3
ECHDC1-210ENST00000454859 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF106Q9H2Y7 1883 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 SMIM23A6NLE4 172 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 H0Y626 953 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 LEFTY2O00292 366 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms