RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PAGE1O75459 146 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 ALDOAP04075 364 aaKnown RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 GJA5P36382 358 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 PTK2BQ14289 1009 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 PFKFB4Q16877 469 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 TAPT1Q6NXT6 567 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 NAPRTQ6XQN6 538 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 HDAC10Q969S8 669 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 PRPF18Q99633 342 aaKnown RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 MRPL46Q9H2W6 279 aaKnown RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 DOCK1Q14185 1865 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 GNGT2O14610 69 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 STRNO43815 780 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 OR1E1P30953 314 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 TBC1D25Q3MII6 688 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 KIAA2013Q8IYS2 634 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 ZNFX1Q9P2E3 1918 aaKnown RBP11.3□□□□□ -0.6
DDR1-240ENST00000454612 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
DDR1-240ENST00000454612 ODC1P11926 461 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 PIK3CGP48736 1102 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 BNC2Q6ZN30 1099 aaPredicted RBP11.3□□□□□ -0.6
DDR1-240ENST00000454612 FRMD7Q6ZUT3 714 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 MILR1Q7Z6M3 343 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 DEFB128Q7Z7B8 93 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 SHCBP1Q8NEM2 672 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 DOLKQ9UPQ8 538 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 DOCK5Q9H7D0 1870 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 IGKV6D-21A0A0A0MT36 114 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 FAM149AA5PLN7 773 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 AGRPO00253 132 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 TIMM44O43615 452 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 CNMDO75829 334 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 FMO4P31512 558 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 IDH3AP50213 366 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 CTXN3Q4LDR2 81 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 KYQ8NBH2 561 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 GABPB2Q8TAK5 448 aaPredicted RBP11.3□□□□□ -0.6
DDR1-240ENST00000454612 CPNE1Q99829 537 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
DDR1-240ENST00000454612 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 NCKIPSDQ9NZQ3 722 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 ADAMTS5Q9UNA0 930 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
DDR1-240ENST00000454612 SNX2O60749 519 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 NDUFS3O75489 264 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 DDHD2O94830 711 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CRHR1P34998 444 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 IQSEC1Q6DN90 963 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CNSTQ6PJW8 725 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 DQX1Q8TE96 717 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 SMARCD1Q96GM5 515 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 SLC45A3Q96JT2 553 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 MUC3BQ9H195 1237 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 KCNH4Q9UQ05 1017 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 DNAJA2O60884 412 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 TFEBP19484 476 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 GRK2P25098 689 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CD151P48509 253 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TAS2R39P59534 338 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 DSC2Q02487 901 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 KLF10Q13118 480 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 RARS2Q5T160 578 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 KYAT3Q6YP21 454 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 DNAJC1Q96KC8 554 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDR1-240ENST00000454612 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TBL1YQ9BQ87 522 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 GRIP2Q9C0E4 1043 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 EBF3Q9H4W6 596 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms