RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 CDH19Q9H159 772 aa13.49□□□□□ -0.25
LINC00343-203ENST00000454555 ZBP1Q9H171 429 aa13.49□□□□□ -0.25
LINC00343-203ENST00000454555 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
LINC00343-203ENST00000454555 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
LINC00343-203ENST00000454555 PIDD1Q9HB75 910 aa13.49□□□□□ -0.25
LINC00343-203ENST00000454555 PSMD13Q9UNM6 376 aa13.49□□□□□ -0.25
LINC00343-203ENST00000454555 ERI2A8K979 691 aaKnown RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 DENRO43583 198 aaKnown RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 TBC1D4O60343 1298 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 GRAP2O75791 330 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 THRAP10827 490 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 COX4I1P13073 169 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 VCLP18206 1134 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ITGAXP20702 1163 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 TBL3Q12788 808 aaKnown RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 GPM6BQ13491 265 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 CNPY1Q3B7I2 92 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 KIAA1841Q6NSI8 718 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 EPGNQ6UW88 154 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 RFX8Q6ZV50 586 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 TTC30AQ86WT1 665 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 C10orf107Q8IVU9 208 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 DLG3Q92796 817 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 CERS2Q96G23 380 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 B3GALT6Q96L58 329 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 RTP3Q9BQQ7 232 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 EBF3Q9H4W6 596 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 LRRC40Q9H9A6 602 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MTMR10Q9NXD2 777 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 NSMCE4AQ9NXX6 385 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 HACD3Q9P035 362 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 NME7Q9Y5B8 376 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 BACE2Q9Y5Z0 518 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 IRAK3Q9Y616 596 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 GRM6O15303 877 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MAP3K13O43283 966 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 TIMM44O43615 452 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ATP9BO43861 1147 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 RNASEH1O60930 286 aaKnown RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 LILRB3O75022 631 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 URODP06132 367 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ZCCHC18P0CG32 403 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 KCNA4P22459 653 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 LMO2P25791 158 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 PCSK1P29120 753 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 CHN2P52757 468 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 LIMK2P53671 638 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 AIF1P55008 147 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 CSE1LP55060 971 aaKnown RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MAP7Q14244 749 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 HERC3Q15034 1050 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MMEL1Q495T6 779 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 ZNF280DQ6N043 979 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 DENND5BQ6ZUT9 1274 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 DEFB107AQ8IZN7 70 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MARVELD2Q8N4S9 558 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 KCTD15Q96SI1 283 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 RBBP8Q99708 897 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 BRD8Q9H0E9 1235 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00343-203ENST00000454555 MTRRQ9UBK8 725 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 RAB26Q9ULW5 256 aa13.48□□□□□ -0.25
LINC00343-203ENST00000454555 NLRC5Q86WI3 1866 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 MEI4A8MW99 385 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 MTSS1O43312 755 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 SERPINB6P35237 376 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 RGS7P49802 495 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 ERVFC1P60507 584 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 CAMK1Q14012 370 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 RAB6CQ53S08 254 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 PDE12Q6L8Q7 609 aaKnown RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 MAVSQ7Z434 540 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 ANKRD52Q8NB46 1076 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 RP9Q8TA86 221 aaKnown RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 PYDC1Q8WXC3 89 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 RAB6CQ9H0N0 254 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 ZNF576Q9H609 170 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 CERS4Q9HA82 394 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 TLR9Q9NR96 1032 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 MRPL17Q9NRX2 175 aaKnown RBP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00343-203ENST00000454555 VTI1BQ9UEU0 232 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 ANKRD6Q9Y2G4 727 aa13.47□□□□□ -0.25
LINC00343-203ENST00000454555 NCAM2O15394 837 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms