RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 SP110Q9HB58 689 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 HECAQ9UBI9 543 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-205ENST00000454542 SUSD2Q9UGT4 822 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 DCHS1Q96JQ0 3298 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 TSPAN11A1L157 253 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 LRRC72A6NJI9 287 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PLK4O00444 970 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 KPNA3O00505 521 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 SPOPO43791 374 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 KRT1P04264 644 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 RGRP47804 291 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 CSNK1DP48730 415 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 RHOAP61586 193 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PPP2CBP62714 309 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PPP2CAP67775 309 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 DUOXA1Q1HG43 343 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 ERN2Q76MJ5 926 aaKnown RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PARS2Q7L3T8 475 aaKnown RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 LRRC49Q8IUZ0 686 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PLD5Q8N7P1 536 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 CEP76Q8TAP6 659 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 FATE1Q969F0 183 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 ZDHHC6Q9H6R6 413 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 RXFP3Q9NSD7 469 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 DDX56Q9NY93 547 aaKnown RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 HYOU1Q9Y4L1 999 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 SLCO1B1Q9Y6L6 691 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 ANKRD36A6QL64 1941 aa14.38□□□□□ -0.11
HDAC4-205ENST00000454542 TP53BP1Q12888 1972 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-205ENST00000454542 CEP250Q9BV73 2442 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 PRR5-ARHGAP8B1AHC4 643 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 KHNYNO15037 678 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 MUSKO15146 869 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 SPINT1O43278 529 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 AP1G1O43747 822 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 POP4O95707 220 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 SERPINF2P08697 491 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 CR2P20023 1033 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 CD27P26842 260 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 GKP32189 559 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 PI4KAP42356 2102 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 MARCKSL1P49006 195 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 NEK3P51956 506 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 ARHGAP8P85298 464 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 MYLK3Q32MK0 819 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 TRIM61Q5EBN2 209 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 KATNAL2Q8IYT4 538 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 ZCCHC9Q8N567 271 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 LRRC57Q8N9N7 239 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 CCDC112Q8NEF3 446 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 OR14C36Q8NHC7 312 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 GANCQ8TET4 914 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 MAML1Q92585 1016 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 EXOC2Q96KP1 924 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 MGME1Q9BQP7 344 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 DESI2Q9BSY9 194 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 CPEB1Q9BZB8 566 aaKnown RBP14.37□□□□□ -0.11
HDAC4-205ENST00000454542 EBF2Q9HAK2 575 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 SEPT3Q9UH03 358 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 DUSP10Q9Y6W6 482 aa14.37□□□□□ -0.11
HDAC4-205ENST00000454542 A0A1B0GTW7 788 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 A0A1W2PPC4 97 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 GRID2IPA4D2P6 1211 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 INSIG1O15503 277 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 ARHGAP6O43182 974 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 PALMO75781 387 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 UGT2B4P06133 528 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 ADRB3P13945 408 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 MAOBP27338 520 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 CTNNA1P35221 906 aaKnown RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 ABL2P42684 1182 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 CDKN2BP42772 138 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 DNA2P51530 1060 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 GBE1Q04446 702 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 SLC10A7Q0GE19 358 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 ZNF805Q5CZA5 627 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 ALG1LQ6GMV1 187 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 NEK5Q6P3R8 708 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 MFSD7Q6UXD7 560 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 RGL4Q8IZJ4 473 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms