RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 FSTL5Q8N475 847 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ZNF570Q96NI8 536 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SIRPGQ9P1W8 387 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PCDHB5Q9Y5E4 795 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 A0A0U1RQS6 177 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 HAS3O00219 553 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 RAMP2O60895 175 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 TBX10O75333 385 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 CD151P48509 253 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 IDH3AP50213 366 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 USP46P62068 366 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 ALFQ53S48 1182 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PCID2Q5JVF3 399 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PRSS55Q6UWB4 352 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 GALNT4Q8N4A0 578 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PCDH20Q8N6Y1 951 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 DCBLD1Q8N8Z6 715 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 FAM156AQ8NDB6 213 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 ZNF398Q8TD17 642 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 POMKQ9H5K3 350 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 ANGPTL2Q9UKU9 493 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 HS3ST4Q9Y661 456 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PAPPA2Q9BXP8 1791 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 ALDH2P05091 517 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 VHLP40337 213 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 UGP2Q16851 508 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 DNAL1Q4LDG9 190 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 RBM20Q5T481 1227 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 LRRC74BQ6ZQY2 392 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 NUP93Q8N1F7 819 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SKA1Q96BD8 255 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 CMTM5Q96DZ9 223 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 BPIFA1Q9NP55 256 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 CCDC167Q9P0B6 97 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SPATA31D3P0C874 917 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 HAPLN1P10915 354 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SLC1A2P43004 574 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 WASHC2DQ5SRD0 308 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 CAPRIN2Q6IMN6 1127 aaKnown RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SPATA31D4Q6ZUB0 917 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SKA2Q8WVK7 121 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SCLYQ96I15 445 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SERPINB11Q96P15 392 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-213ENST00000454468 DSEQ9UL01 958 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
SMPD4-213ENST00000454468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-213ENST00000454468 HNRNPCL1O60812 293 aaKnown RBP12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ARSAP15289 507 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 FAM83EQ2M2I3 478 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 PKN3Q6P5Z2 889 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 SCIMPQ6UWF3 145 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ZNF276Q8N554 614 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
SMPD4-213ENST00000454468 OR6K2Q8NGY2 324 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CD99L2Q8TCZ2 262 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CDRT15Q96T59 188 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CYLDQ9NQC7 956 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-213ENST00000454468 RNF186Q9NXI6 227 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ETAA1Q9NY74 926 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 LCTP09848 1927 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 BIRC5O15392 142 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 TOMM70O94826 608 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 TGDSO95455 350 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 SERPINA6P08185 405 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ITGB6P18564 788 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ACVRL1P37023 503 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 KCNQ1P51787 676 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ADAM17P78536 824 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ZNF789Q5FWF6 425 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 ARCQ7LC44 396 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 OR7D4Q8NG98 312 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 TBATAQ96M53 351 aa12.11□□□□□ -0.47
SMPD4-213ENST00000454468 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms