RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ABCB8Q9NUT2 735 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 PIH1D1Q9NWS0 290 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 DUS2Q9NX74 493 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 EURLQ9NYK6 297 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 OGFRQ9NZT2 677 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 LHX3Q9UBR4 397 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SEPT3Q9UH03 358 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 RABGEF1Q9UJ41 708 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CDH7Q9ULB5 785 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CHMP2BQ9UQN3 213 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 A0A087WUV0 522 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA6CA6NDK9 693 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 NEDD8-MDP1E9PL57 170 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 K7ERQ8 282 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TRIM24O15164 1050 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 INSIG1O15503 277 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 HOXC11O43248 304 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SMAD6O43541 496 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 OPA1O60313 960 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 PMPCBO75439 489 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF821O75541 412 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ALDH1A2O94788 518 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TMCC1O94876 653 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 GSTA2P09210 222 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ATXN1LP0C7T5 689 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA6DP0CG33 693 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 LAMP2P13473 410 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ARSAP15289 507 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TPH1P17752 444 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 PRKCHP24723 683 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CTSOP43234 321 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CHRNA4P43681 627 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SESN2P58004 480 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CRADDP78560 199 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SLC20A2Q08357 652 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ITKQ08881 620 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 NSUN2Q08J23 767 aaKnown RBP eCLIP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FCHO2Q0JRZ9 810 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CDH17Q12864 832 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF235Q14590 738 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 STAT4Q14765 748 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FUT11Q495W5 492 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 PITRM1Q5JRX3 1037 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TMEM215Q68D42 235 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CES5AQ6NT32 575 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 NCEH1Q6PIU2 408 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 VITQ6UXI7 678 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 UNC5AQ6ZN44 842 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CYS1Q717R9 158 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 LINC00523Q86TU6 105 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TMEM135Q86UB9 458 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ADIPOR2Q86V24 386 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 C12orf40Q86WS4 652 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CCDC117Q8IWD4 279 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 MFSD6LQ8IWD5 586 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ETFBKMTQ8IXQ9 262 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 PALM2Q8IXS6 379 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ATP11CQ8NB49 1132 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 IPMKQ8NFU5 416 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 EPS8L3Q8TE67 593 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FBF1Q8TES7 1133 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SUSD6Q92537 303 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TTC17Q96AE7 1141 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ZFYVE19Q96K21 471 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FCRL3Q96P31 734 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 XPO6Q96QU8 1125 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 NUDCD1Q96RS6 583 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TRIB3Q96RU7 358 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TBL1YQ9BQ87 522 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 DHRS4Q9BTZ2 278 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FICDQ9BVA6 458 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CINPQ9BW66 212 aaPredicted RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SLC2A11Q9BYW1 496 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 POLR1EQ9GZS1 481 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 POMKQ9H5K3 350 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ACSS3Q9H6R3 686 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 NOD2Q9HC29 1040 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 MED4Q9NPJ6 270 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 HPS4Q9NQG7 708 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SMYD2Q9NRG4 433 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 SYBUQ9NX95 663 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 CLDND1Q9NY35 253 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA6AQ9NYA3 693 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 MOCS1Q9NZB8 636 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ZC3H7BQ9UGR2 993 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 VPS28Q9UK41 221 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 FCF1Q9Y324 198 aaKnown RBP6.08□□□□□ -1.44
SDC4P-201ENST00000453285 TTLL3Q9Y4R7 772 aa6.08□□□□□ -1.44
SDC4P-201ENST00000453285 ZCWPW2A0A1B0GU75 182 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 FAM237BA0A1B0GVD1 139 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 TCRBV9S1A1TA0A576 114 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 CXorf49A8MYA2 514 aaPredicted RBP6.07□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA8KD6RF30 607 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 AP3B1O00203 1094 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 RASGRF2O14827 1237 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 ATP9BO43861 1147 aa6.07□□□□□ -1.44
SDC4P-201ENST00000453285 SPAG6O75602 509 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms