RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MAGEA11P43364 429 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ZP2Q05996 745 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 PLD1Q13393 1074 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 PABPC1LQ4VXU2 614 aaKnown RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 AFMIDQ63HM1 303 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CES3Q6UWW8 571 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 DNAJB7Q7Z6W7 309 aaPredicted RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 MON1AQ86VX9 555 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NUP93Q8N1F7 819 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ELMOD1Q8N336 334 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 LZTR1Q8N653 840 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 RFWD2Q8NHY2 731 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ACMSDQ8TDX5 336 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ADAMTS19Q8TE59 1207 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CERS2Q96G23 380 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 LRRC3Q9BY71 257 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CATSPERBQ9H7T0 1116 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 BFARQ9NZS9 450 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NUDT5Q9UKK9 219 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 RPS6KL1Q9Y6S9 549 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 NUP205Q92621 2012 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ZCWPW2A0A1B0GU75 182 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 DCTN3O75935 186 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 TGDSO95455 350 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ERVK-10P10266 1014 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ALDH3A1P30838 453 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 CCR2P41597 374 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 USP46P62068 366 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 OVGP1Q12889 678 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 CYB5D1Q6P9G0 228 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ASRGL1Q7L266 308 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 GET4Q7L5D6 327 aaPredicted RBP10.88□□□□□ -0.67
PKP4-206ENST00000452162 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ATPAF2Q8N5M1 289 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ITFG1Q8TB96 612 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 PSMG2Q969U7 264 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ZNF669Q96BR6 464 aaPredicted RBP10.88□□□□□ -0.67
PKP4-206ENST00000452162 ERP27Q96DN0 273 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 TCEAL4Q96EI5 215 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 SLC39A13Q96H72 371 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ZNF419Q96HQ0 510 aaPredicted RBP10.88□□□□□ -0.67
PKP4-206ENST00000452162 SERPINB11Q96P15 392 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 IL12RB2Q99665 862 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 SLC39A8Q9C0K1 460 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ZNF334Q9HCZ1 680 aaPredicted RBP10.88□□□□□ -0.67
PKP4-206ENST00000452162 CD320Q9NPF0 282 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 KLC4Q9NSK0 619 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 IL37Q9NZH6 218 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 HS3ST4Q9Y661 456 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 C2CD4DB7Z1M9 353 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 DFFAO00273 331 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 HGSO14964 777 aaPredicted RBP10.88□□□□□ -0.67
PKP4-206ENST00000452162 MAFKO60675 156 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 USP1O94782 785 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ITGA2BP08514 1039 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 FSHRP23945 695 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 NPY2RP49146 381 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 SETDB1Q15047 1291 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ANKRD20A4Q4UJ75 823 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 STXBP5Q5T5C0 1151 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 CES4AQ5XG92 561 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 POTEHQ6S545 545 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 NLRP9Q7RTR0 991 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 OTOP3Q7RTS5 596 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 C14orf80Q86SX3 495 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 TMC8Q8IU68 726 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 TRIM42Q8IWZ5 723 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 DNAAF3Q8N9W5 541 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.88□□□□□ -0.67
PKP4-206ENST00000452162 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 LRRC37BQ96QE4 947 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 MYADMQ96S97 322 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 MECRQ9BV79 373 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 NDFIP2Q9NV92 336 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 IL1RAPL1Q9NZN1 696 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 GMIPQ9P107 970 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 ASB3Q9Y575 518 aa10.88□□□□□ -0.67
PKP4-206ENST00000452162 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 FAM237BA0A1B0GVD1 139 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 FAM92AA1XBS5 289 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 WASH4PA8MWX3 477 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 E9PAM4 449 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 TPP1O14773 563 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 PSMD3O43242 534 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 UNC5CO95185 931 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 TOP3BO95985 862 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 MYL4P12829 197 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 NQO1P15559 274 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 GJA1P17302 382 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 GP5P40197 560 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 TUBP50607 506 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms