RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ISCUQ9H1K1 167 aa16.31■□□□□ 0.2
SGCE-208ENST00000450385 TNKS2Q9H2K2 1166 aa16.31■□□□□ 0.2
SGCE-208ENST00000450385 NDFIP2Q9NV92 336 aa16.31■□□□□ 0.2
SGCE-208ENST00000450385 ARID1BQ8NFD5 2236 aaPredicted RBP16.31■□□□□ 0.2
SGCE-208ENST00000450385 A0A1W2PQU0 124 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 GOLGA6L19H0YKK7 550 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 PCDH8O95206 1070 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 GJB6O95452 261 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 NUMBP49757 651 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 DNA2P51530 1060 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 SERINC3Q13530 473 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 MYLK3Q32MK0 819 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 TMEM259Q4ZIN3 620 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 RAB6CQ53S08 254 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
SGCE-208ENST00000450385 TMEM121BQ9BXQ6 578 aaPredicted RBP16.3■□□□□ 0.2
SGCE-208ENST00000450385 CPEB1Q9BZB8 566 aaKnown RBP16.3■□□□□ 0.2
SGCE-208ENST00000450385 RAB6CQ9H0N0 254 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 DKK3Q9UBP4 350 aa16.3■□□□□ 0.2
SGCE-208ENST00000450385 TOR1BO14657 336 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 BUB1O43683 1085 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 TPM3P06753 285 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 PSMA2P25787 234 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 MAT2AP31153 395 aaKnown RBP16.29■□□□□ 0.2
SGCE-208ENST00000450385 PCK1P35558 622 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 UBASH3AP57075 661 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 ILKQ13418 452 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 TMCO4Q5TGY1 634 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 CCNI2Q6ZMN8 369 aaPredicted RBP16.29■□□□□ 0.2
SGCE-208ENST00000450385 TMPRSS7Q7RTY8 843 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 ABI3BPQ7Z7G0 1075 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 CHCHD4Q8N4Q1 142 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 LZTR1Q8N653 840 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 GRIN3AQ8TCU5 1115 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 SLC17A9Q9BYT1 436 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 TAS2R14Q9NYV8 317 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 FTSJ1Q9UET6 329 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 FCF1Q9Y324 198 aaKnown RBP16.29■□□□□ 0.2
SGCE-208ENST00000450385 FADS3Q9Y5Q0 445 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 DMXL2Q8TDJ6 3036 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 USP24Q9UPU5 2620 aa16.29■□□□□ 0.2
SGCE-208ENST00000450385 RASA4BC9J798 803 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 PLK4O00444 970 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 KCNK3O14649 394 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 WNT9AO14904 365 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 RASA4O43374 803 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 CREB3O43889 395 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 PRPSAP2O60256 369 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 LDOC1O95751 146 aaPredicted RBP16.28■□□□□ 0.2
SGCE-208ENST00000450385 IGSF6O95976 241 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 EPHA8P29322 1005 aaPredicted RBP16.28■□□□□ 0.2
SGCE-208ENST00000450385 TPI1P60174 286 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 ZBED6P86452 979 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 FANCCQ00597 558 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 SGCGQ13326 291 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 POM121L1PQ3SYA9 428 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 DENND6BQ8NEG7 585 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 NOL6Q9H6R4 1146 aaKnown RBP16.28■□□□□ 0.2
SGCE-208ENST00000450385 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
SGCE-208ENST00000450385 CAPN11Q9UMQ6 739 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 AP4E1Q9UPM8 1137 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 BTBD3Q9Y2F9 522 aa16.28■□□□□ 0.2
SGCE-208ENST00000450385 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 PLXNB3Q9ULL4 1909 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 AKAP13Q12802 2813 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 FAM170AA1A519 330 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 SYCE3A1L190 88 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 ARHGAP42A6NI28 874 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 C16orf96A6NNT2 1141 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 DDX3XO00571 662 aaKnown RBP eCLIP16.27■□□□□ 0.22e-26■■■□□ 14.6
SGCE-208ENST00000450385 SLC31A1O15431 190 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 SERPING1P05155 500 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 THEGLP0DJG4 465 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 PBX1P40424 430 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 CSNK1DP48730 415 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 NSUN2Q08J23 767 aaKnown RBP eCLIP16.27■□□□□ 0.2
SGCE-208ENST00000450385 PIGHQ14442 188 aaPredicted RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 RFTN1Q14699 578 aaPredicted RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 SHBQ15464 509 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 SMAD1Q15797 465 aaKnown RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 LAYNQ6UX15 382 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 GDPD4Q6W3E5 623 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 DNAAF5Q86Y56 855 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 CACTIN-AS1Q8N1I8 211 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 PYROXD2Q8N2H3 581 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 ZNF641Q96N77 438 aaPredicted RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 C1QTNF7Q9BXJ2 289 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 C1QTNF2Q9BXJ5 285 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 LRRC19Q9H756 370 aa16.27■□□□□ 0.2
SGCE-208ENST00000450385 KLK13Q9UKR3 277 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms